C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FERM domain containing 4A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151474 FRMD4A 9606 - 10:13643706-14462142 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264546 FRMD4A-005 13666224-13972369 protein_coding
  ENST00000342409 FRMD4A-004 13693703-14008533 protein_coding
  ENST00000357447 FRMD4A-003 13643706-14330884 protein_coding
  ENST00000358621 FRMD4A-201 13643706-13858912 protein_coding
  ENST00000475141 FRMD4A-002 14326175-14462142 protein_coding
  ENST00000475325 FRMD4A-011 13646272-13654526 processed_transcript
  ENST00000477221 FRMD4A-008 13693983-13707567 processed_transcript
  ENST00000492155 FRMD4A-007 13692169-13707757 processed_transcript
  ENST00000493380 FRMD4A-001 14082947-14462094 protein_coding
  ENST00000495956 FRMD4A-010 13646334-13657123 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000357447ENST00000358621ENST00000475325ENST00000495956
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000357447 N/A N/A 1.837±0.00 3.808±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000358621 9.139±0.00 7.219±0.00 N/A 3.105±0.00 8.229±5.99 3.333±1.54 2.865±1.56 1.774±0.05 1.421±0.00 1.071±0.00 3.248±0.86 2.368±0.27 4.093±0.00
ENST00000475325 N/A 35.007±0.00 N/A N/A N/A N/A N/A N/A 13.944±0.00 N/A N/A N/A N/A
ENST00000495956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.075±0.85 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000968 CIL_000968_0001 VISTA 10:13045564-13647145
CIL_000965 CIL_000965_0001 VISTA 10:13372414-13973663
CIL_000966 CIL_000966_0001 VISTA 10:13410200-14012149
CIL_00061W CIL_00061W_0002 CGP 10:13610047-14462142
CIL_000964 CIL_000964_0001 VISTA 10:13639094-14239892

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005923 IEA tight junction
GO:0030674 IEA protein binding, bridging
GO:0090162 IEA establishment of epithelial cell polarity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000042249 FRMD4A FERM domain containing 4A protein_coding Danio_rerio
ENSMUSG00000026657 Frmd4a FERM domain containing 4A protein_coding Mus_musculus

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