C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member F4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000151812 SLC35F4 9606 - 14:57563922-57982194 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339762 SLC35F4-201 57563922-57596897 protein_coding
  ENST00000554648 SLC35F4-006 57976751-57982063 processed_transcript
  ENST00000554729 SLC35F4-001 57563978-57596897 protein_coding
  ENST00000556306 SLC35F4-008 57569863-57581335 nonsense_mediated_decay
  ENST00000556568 SLC35F4-005 57604008-57982194 processed_transcript
  ENST00000556826 SLC35F4-004 57563922-57866062 protein_coding
  ENST00000557254 SLC35F4-007 57564139-57596897 nonsense_mediated_decay
  ENST00000557430 SLC35F4-003 57594045-57799507 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000554729ENST00000556306ENST00000556568ENST00000556826ENST00000557254ENST00000557430
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000554729 N/A 0.160±0.06 N/A N/A N/A N/A N/A 0.042±0.00 0.012±0.00 0.450±0.13
ENST00000556306 N/A N/A N/A N/A N/A N/A 0.774±0.00 N/A N/A N/A
ENST00000556568 N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000556826 N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A 0.298±0.00
ENST00000557254 0.110±0.00 0.076±0.02 0.108±0.08 N/A N/A 0.052±0.00 0.093±0.00 0.022±0.00 0.007±0.00 N/A
ENST00000557430 N/A N/A N/A N/A 0.265±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0001 CGP 14:57469301-57982194
CIL_00022F CIL_00022F_0001 CGP 14:57563922-58298139

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014487 SLC35F4 solute carrier family 35, member F4 protein_coding Danio_rerio
ENSMUSG00000021852 Slc35f4 solute carrier family 35, member F4 protein_coding Mus_musculus

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