C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier family 35, member F4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554729 SLC35F4-001 ENSG00000151812 9606 - 14:57563978-57596897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENST00000554729
Transcript ID Brain Ovary Placenta Testis
ENST00000554729 0.160±0.06 0.042±0.00 0.012±0.00 0.450±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0001 CGP 14:57469301-57982194
CIL_00022F CIL_00022F_0001 CGP 14:57563922-58298139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074368 Slc35f4-001 protein_coding Mus_musculus 0 1838
ENSMUST00000138884 Slc35f4-002 protein_coding Mus_musculus 0 1312
ENSMUST00000123534 Slc35f4-004 protein_coding Mus_musculus 0 931
ENSMUST00000146164 Slc35f4-003 retained_intron Mus_musculus 0 610
ENSMUST00000135254 Slc35f4-005 processed_transcript Mus_musculus 0 394

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