C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 35, member F4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021852 Slc35f4 10090 - 14:49298519-49526046 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000074368 Slc35f4-001 49298519-49525886 protein_coding
  ENSMUST00000123534 Slc35f4-004 49312091-49526046 protein_coding
  ENSMUST00000135254 Slc35f4-005 49303306-49314209 processed_transcript
  ENSMUST00000138884 Slc35f4-002 49298519-49525865 protein_coding
  ENSMUST00000146164 Slc35f4-003 49317055-49525853 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000074368ENSMUST00000123534ENSMUST00000135254ENSMUST00000138884ENSMUST00000146164
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000074368 N/A N/A 1.502±0.26 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A 0.026±0.02 N/A
ENSMUST00000123534 N/A N/A 0.374±0.04 N/A N/A N/A N/A 0.003±0.00 0.017±0.00 N/A 0.008±0.00 0.006±0.00 0.039±0.04
ENSMUST00000135254 0.028±0.00 0.006±0.00 N/A N/A N/A 0.027±0.00 N/A 0.035±0.00 N/A 0.039±0.01 0.037±0.01 0.035±0.02 0.014±0.00
ENSMUST00000138884 N/A 0.027±0.00 3.934±0.00 0.053±0.00 0.100±0.00 0.025±0.01 0.033±0.00 0.023±0.00 N/A 0.030±0.00 0.055±0.01 0.003±0.00 0.039±0.01
ENSMUST00000146164 N/A N/A 0.215±0.00 N/A N/A N/A N/A N/A N/A 0.029±0.01 0.006±0.00 N/A 0.016±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0002 CGP 14:49226358-49526046
CIL_00022F CIL_00022F_0002 CGP 14:49298519-49783383

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014487 SLC35F4 solute carrier family 35, member F4 protein_coding Danio_rerio
ENSG00000151812 SLC35F4 solute carrier family 35, member F4 protein_coding Homo_sapiens

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