C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 35, member F4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557254 SLC35F4-007 ENSG00000151812 9606 - 14:57564139-57596897 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverOvaryPlacentaENST00000557254
Transcript ID Adrenal Brain Breast Kidney Liver Ovary Placenta
ENST00000557254 0.110±0.00 0.076±0.02 0.108±0.08 0.052±0.00 0.093±0.00 0.022±0.00 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019V CIL_00019V_0001 CGP 14:57469301-57982194
CIL_00022F CIL_00022F_0001 CGP 14:57563922-58298139

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074368 Slc35f4-001 protein_coding Mus_musculus 0 950
ENSMUST00000123534 Slc35f4-004 protein_coding Mus_musculus 0 942
ENSMUST00000138884 Slc35f4-002 protein_coding Mus_musculus 0 763
ENSMUST00000146164 Slc35f4-003 retained_intron Mus_musculus 0 621
ENSMUST00000135254 Slc35f4-005 processed_transcript Mus_musculus 0 392

Loading