C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cation channel, sperm associated 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000152705 CATSPER3 9606 + 5:134967906-135011707 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282611 CATSPER3-001 134967906-135011707 protein_coding
  ENST00000511235 CATSPER3-002 134967907-134995854 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENST00000282611
Transcript ID Ovary Testis
ENST00000282611 0.752±0.00 21.097±4.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JT CIL_0007JT_0002 UCNEbase 5:134524545-135264654
CIL_0009AP CIL_0009AP_0001 VISTA 5:134719818-135321709
CIL_0005XS CIL_0005XS_0001 CGP 5:134873803-135007959
CIL_0005XV CIL_0005XV_0001 CGP 5:134904906-135011707
CIL_0005XU CIL_0005XU_0001 CGP 5:134967906-135034813

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001669 IEA acrosomal vesicle
GO:0005216 IEA ion channel activity
GO:0005227 IEA calcium activated cation channel activity
GO:0005245 IBA voltage-gated calcium channel activity
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IBA plasma membrane
GO:0006811 IEA ion transport
GO:0006814 IEA sodium ion transport
GO:0007275 IEA multicellular organismal development
GO:0007338 TAS single fertilization
GO:0016020 IEA membrane
GO:0030317 IBA sperm motility
GO:0031514 IEA motile cilium
GO:0032504 TAS multicellular organism reproduction
GO:0034765 IEA regulation of ion transmembrane transport
GO:0035036 TAS sperm-egg recognition
GO:0036128 ISS CatSper complex
GO:0048240 IEA sperm capacitation
GO:0055085 IEA transmembrane transport
GO:0070509 IBA calcium ion import
GO:0070588 IEA calcium ion transmembrane transport
GO:0086010 IBA membrane depolarization during action potential

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000021499 Catsper3 cation channel, sperm associated 3 protein_coding Mus_musculus

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