C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: signal recognition particle 19kDa
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153037 SRP19 9606 + 5:112861188-112869788 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000282999 SRP19-002 112861305-112867935 protein_coding
  ENST00000445150 SRP19-005 112861332-112865219 protein_coding
  ENST00000504696 SRP19-010 112864609-112867752 retained_intron
  ENST00000505459 SRP19-001 112861222-112869788 protein_coding
  ENST00000506987 SRP19-004 112862362-112867724 retained_intron
  ENST00000515463 SRP19-008 112861310-112867771 protein_coding
  ENST00000515755 SRP19-003 112861326-112864919 retained_intron
  ENST00000621420 SRP19-201 112861188-112868392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000282999
Transcript ID Ovary Placenta Testis
ENST00000282999 9.329±0.00 13.148±0.00 17.394±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UN CIL_0004UN_0001 CGP 5:112861188-112922539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005786 IDA signal recognition particle, endoplasmic reticulum targeting
GO:0005829 TAS cytosol
GO:0006412 TAS translation
GO:0006613 TAS cotranslational protein targeting to membrane
GO:0006614 TAS:IEA SRP-dependent cotranslational protein targeting to membrane
GO:0008312 IDA:IEA 7S RNA binding
GO:0010467 TAS gene expression
GO:0042493 IDA response to drug
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0048500 IEA signal recognition particle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035699 srp19 signal recognition particle 19 protein_coding Danio_rerio
ENSMUSG00000014504 Srp19 signal recognition particle 19 protein_coding Mus_musculus

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