C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004UN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153037-ENSG00000129625 CGP 9606 5:112861188-112922539
GeneTranscriptPositionBiotype
ENSG00000129625 (REEP5)
receptor accessory protein 5 		ENST00000261482 (REEP5-004) 112878833-112921997 protein_coding
ENST00000379638 (REEP5-001) 112876379-112922539 protein_coding
ENST00000474542 (REEP5-003) 112887015-112921504 processed_transcript
ENST00000497856 (REEP5-002) 112878085-112921514 retained_intron
ENST00000504247 (REEP5-008) 112887015-112922289 protein_coding
ENST00000511865 (REEP5-006) 112878577-112922230 nonsense_mediated_decay
ENST00000513339 (REEP5-007) 112878085-112922227 protein_coding
ENSG00000153037 (SRP19)
signal recognition particle 19kDa 		ENST00000282999 (SRP19-002) 112861305-112867935 protein_coding
ENST00000445150 (SRP19-005) 112861332-112865219 protein_coding
ENST00000504696 (SRP19-010) 112864609-112867752 retained_intron
ENST00000505459 (SRP19-001) 112861222-112869788 protein_coding
ENST00000506987 (SRP19-004) 112862362-112867724 retained_intron
ENST00000515463 (SRP19-008) 112861310-112867771 protein_coding
ENST00000515755 (SRP19-003) 112861326-112864919 retained_intron
ENST00000621420 (SRP19-201) 112861188-112868392 protein_coding
ENSG00000249947 (XBP1P1)
X-box binding protein 1 pseudogene 1 		ENST00000436573 (XBP1P1-001) 112885094-112885745 processed_pseudogene
ENSG00000266499 (AC008536.1)
 ENST00000579867 (AC008536.1-201) 112905638-112905737 miRNA
ENSG00000270067 (CTC-487M23.5)
 ENST00000602872 (CTC-487M23.5-001) 112893333-112894001 antisense
ENSG00000272389 (CTC-487M23.7)
 ENST00000607284 (CTC-487M23.7-001) 112898023-112898371 antisense
ENSG00000279522 (CTC-487M23.6)
 ENST00000623282 (CTC-487M23.6-001) 112894933-112896531 TEC
CIL_0004UN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000014504-ENSMUSG00000005873 CGP 10090 18:34330847-34373415
GeneTranscriptPositionBiotype
ENSMUSG00000005873 (Reep5)
receptor accessory protein 5 		ENSMUST00000006027 (Reep5-201) 34344889-34373415 protein_coding
ENSMUSG00000014504 (Srp19)
signal recognition particle 19 		ENSMUST00000072576 (Srp19-001) 34331145-34336599 protein_coding
ENSMUST00000119329 (Srp19-006) 34331158-34336421 protein_coding
ENSMUST00000126518 (Srp19-004) 34330847-34336345 processed_transcript
ENSMUST00000131713 (Srp19-005) 34331123-34336521 processed_transcript
ENSMUST00000140279 (Srp19-002) 34331145-34336551 retained_intron
ENSMUST00000142010 (Srp19-003) 34331176-34336553 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UN_0001ENSG00000129625ENST00000261482ENST00000379638ENST00000474542ENST00000497856ENST00000504247ENST00000511865ENST00000513339ENSG00000153037ENST00000282999ENST00000445150ENST00000504696ENST00000505459ENST00000506987ENST00000515463ENST00000515755ENST00000621420ENSG00000249947ENST00000436573ENSG00000266499ENST00000579867ENSG00000270067ENST00000602872ENSG00000272389ENST00000607284ENSG00000279522ENST00000623282CIL_0004UN_0002ENSMUSG00000005873ENSMUST00000006027ENSMUSG00000014504ENSMUST00000072576ENSMUST00000119329ENSMUST00000126518ENSMUST00000131713ENSMUST00000140279ENSMUST00000142010
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004UN_0001ENSG00000129625ENST00000261482ENST00000379638ENST00000511865ENSG00000153037ENST00000282999ENSG00000249947ENST00000436573ENSG00000266499ENST00000579867ENSG00000270067ENST00000602872ENSG00000272389ENST00000607284ENSG00000279522ENST00000623282CIL_0004UN_0002ENSMUSG00000005873ENSMUST00000006027ENSMUSG00000014504ENSMUST00000072576ENSMUST00000119329ENSMUST00000126518ENSMUST00000131713ENSMUST00000140279
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129625 ENST00000261482 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 70.007±12.22 N/A
ENST00000379638 22.264±0.00 19.957±0.00 13.396±0.00 56.094±21.01 25.215±19.84 28.614±0.00 20.910±15.79 36.182±28.27 21.238±8.24 18.500±13.28 15.112±6.51 14.714±9.47 15.244±4.14 31.126±0.00
ENST00000474542 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.105±0.00 42.874±8.31 48.352±0.00
ENST00000513339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000153037 ENST00000282999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.329±0.00 13.148±0.00 17.394±0.00
ENST00000445150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505459 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621420 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249947 ENST00000436573 0.152±0.00 0.458±0.00 0.181±0.00 0.255±0.15 0.440±0.16 0.454±0.28 0.084±0.00 0.457±0.00 0.090±0.03 0.171±0.00 N/A 0.101±0.00 0.118±0.02 0.181±0.08
ENSG00000266499 ENST00000579867 0.254±0.00 1.614±0.00 N/A 0.881±0.00 1.407±0.00 0.985±0.00 N/A N/A N/A N/A N/A N/A N/A 1.249±0.00
ENSG00000270067 ENST00000602872 0.618±0.00 1.086±0.00 N/A 0.754±0.25 0.958±0.30 0.581±0.43 0.336±0.24 1.849±0.00 0.538±0.19 0.866±0.07 0.490±0.00 1.308±1.16 0.261±0.17 1.663±0.61
ENSG00000272389 ENST00000607284 0.330±0.00 0.626±0.00 N/A 0.259±0.00 2.376±1.92 N/A 0.166±0.00 0.459±0.00 0.467±0.00 0.307±0.00 N/A 0.280±0.05 0.346±0.18 0.283±0.05
ENSG00000279522 ENST00000623282 0.433±0.00 0.717±0.00 0.148±0.00 0.313±0.21 0.499±0.09 0.319±0.16 0.202±0.11 0.542±0.39 0.219±0.08 0.479±0.00 0.292±0.00 0.456±0.24 0.117±0.07 0.614±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000005873 ENSMUST00000006027 148.433±57.37 152.654±6.52 55.082±2.77 57.933±2.65 90.563±15.68 49.539±3.21 109.769±6.55 46.371±3.22 14.077±7.08 71.504±4.34 39.610±1.38 47.763±16.12 24.314±8.19 7.060±2.86
ENSMUSG00000014504 ENSMUST00000072576 6.175±0.45 4.173±0.00 24.428±2.51 15.540±7.28 4.272±1.08 4.947±0.75 8.410±0.64 5.600±0.64 22.728±20.58 5.034±0.66 18.031±1.54 5.271±1.94 29.288±15.26 10.231±4.34
ENSMUST00000119329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.594±4.65 N/A
ENSMUST00000126518 N/A N/A N/A 5.730±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.154±0.00
ENSMUST00000131713 N/A N/A N/A N/A N/A N/A N/A N/A 1.822±0.11 N/A 9.071±1.78 34.341±1.64 37.650±13.46 5.159±1.96
ENSMUST00000140279 1.176±0.60 2.237±0.72 3.034±0.46 2.023±1.14 1.297±0.22 1.611±0.28 0.950±0.12 0.733±0.15 2.158±1.18 1.938±0.31 0.671±0.00 1.927±0.62 1.428±0.79 0.994±0.33
ENSMUST00000142010 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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