C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal recognition particle 19kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621420 SRP19-201 ENSG00000153037 9606 + 5:112861188-112868392 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UN CIL_0004UN_0001 CGP 5:112861188-112922539

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006614 IEA SRP-dependent cotranslational protein targeting to membrane
GO:0008312 IEA 7S RNA binding
GO:0048500 IEA signal recognition particle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119329 Srp19-006 protein_coding Mus_musculus 0 494
ENSMUST00000131713 Srp19-005 processed_transcript Mus_musculus 0 324
ENSMUST00000142010 Srp19-003 nonsense_mediated_decay Mus_musculus 7.00005e-41 172
ENSMUST00000072576 Srp19-001 protein_coding Mus_musculus 7.00005e-41 172
ENSMUST00000140279 Srp19-002 retained_intron Mus_musculus 7.00005e-41 172

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