C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SPHK1 interactor, AKAP domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000153820 SPHKAP 9606 - 2:227979950-228181645 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000344657 SPHKAP-001 227979957-228181626 protein_coding
  ENST00000392056 SPHKAP-002 227979950-228181645 protein_coding
  ENST00000490603 SPHKAP-003 227990908-227995635 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344657ENST00000392056ENST00000490603
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344657 N/A 0.013±0.00 3.172±0.49 0.027±0.02 0.080±0.04 11.900±7.70 0.017±0.00 0.013±0.01 0.134±0.00 0.005±0.00 1.042±0.31 0.055±0.00 0.066±0.03
ENST00000392056 0.128±0.00 N/A 1.103±0.52 0.136±0.00 N/A 3.081±0.00 0.048±0.00 N/A N/A N/A 0.376±0.00 N/A 0.034±0.00
ENST00000490603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AJ CIL_0004AJ_0002 CGP 2:227871054-228181645
CIL_0004AK CIL_0004AK_0002 CGP 2:227979950-229271285

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IEA mitochondrion
GO:0030018 IEA Z disc
GO:0051018 IDA protein kinase A binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017429 sphkap SPHK1 interactor, AKAP domain containing protein_coding Danio_rerio
ENSMUSG00000026163 Sphkap SPHK1 interactor, AKAP domain containing protein_coding Mus_musculus

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