C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SPHK1 interactor, AKAP domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344657 SPHKAP-001 ENSG00000153820 9606 - 2:227979957-228181626 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000344657
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000344657 0.013±0.00 3.172±0.49 0.027±0.02 0.080±0.04 11.900±7.70 0.017±0.00 0.013±0.01 0.134±0.00 0.005±0.00 1.042±0.31 0.055±0.00 0.066±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AJ CIL_0004AJ_0002 CGP 2:227871054-228181645
CIL_0004AK CIL_0004AK_0002 CGP 2:227979950-229271285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0051018 IDA protein kinase A binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160953 Sphkap-001 protein_coding Mus_musculus 0 2159
ENSMUST00000053075 Sphkap-003 retained_intron Mus_musculus 0 1650
ENSMUST00000159078 Sphkap-002 protein_coding Mus_musculus 0 1650

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