C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021462-ENSDARG00000017429 CGP 7955 18:44790937-44872954
GeneTranscriptPositionBiotype
ENSDARG00000017429 (sphkap)
SPHK1 interactor, AKAP domain containing 		ENSDART00000040669 (sphkap-001) 44804362-44872954 protein_coding
ENSDARG00000021462 (daw1)
dynein assembly factor with WDR repeat domains 1 		ENSDART00000024202 (daw1-201) 44790937-44802532 protein_coding
ENSDART00000142790 (daw1-001) 44790951-44802533 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0004AJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000123977-ENSG00000153820 CGP 9606 2:227871054-228181645
GeneTranscriptPositionBiotype
ENSG00000123977 (DAW1)
dynein assembly factor with WDR repeat domains 1 		ENST00000309931 (DAW1-001) 227871607-227924341 protein_coding
ENST00000373666 (DAW1-002) 227871054-227924344 protein_coding
ENST00000440997 (DAW1-003) 227871635-227890000 protein_coding
ENST00000454999 (DAW1-004) 227871642-227903086 nonsense_mediated_decay
ENST00000472604 (DAW1-005) 227889513-227895591 processed_transcript
ENSG00000153820 (SPHKAP)
SPHK1 interactor, AKAP domain containing 		ENST00000344657 (SPHKAP-001) 227979957-228181626 protein_coding
ENST00000392056 (SPHKAP-002) 227979950-228181645 protein_coding
ENST00000490603 (SPHKAP-003) 227990908-227995635 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0004AJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053161-ENSMUSG00000026163 CGP 10090 1:83159752-83408200
GeneTranscriptPositionBiotype
ENSMUSG00000026163 (Sphkap)
SPHK1 interactor, AKAP domain containing 		ENSMUST00000053075 (Sphkap-003) 83265127-83408165 retained_intron
ENSMUST00000159078 (Sphkap-002) 83255442-83279165 protein_coding
ENSMUST00000160237 (Sphkap-005) 83339146-83408139 retained_intron
ENSMUST00000160567 (Sphkap-004) 83384843-83408165 retained_intron
ENSMUST00000160953 (Sphkap-001) 83254139-83408200 protein_coding
ENSMUSG00000053161 (Daw1)
dynein assembly factor with WDR repeat domains 1 		ENSMUST00000065403 (Daw1-004) 83159781-83210574 protein_coding
ENSMUST00000065436 (Daw1-002) 83159762-83210568 protein_coding
ENSMUST00000113436 (Daw1-001) 83159762-83210574 protein_coding
ENSMUST00000133079 (Daw1-005) 83159752-83179824 retained_intron
ENSMUST00000149342 (Daw1-003) 83159769-83210570 nonsense_mediated_decay
ENSMUSG00000079140 (Gm6374)
predicted gene 6374 		ENSMUST00000159051 (Gm6374-001) 83314513-83315300 processed_pseudogene
ENSMUSG00000101896 (RP24-383H12.1)
predicted gene 6244 		ENSMUST00000178732 (RP24-383H12.1-001) 83212044-83212884 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AJ_0001ENSDARG00000017429ENSDART00000040669ENSDARG00000021462ENSDART00000024202ENSDART00000142790CIL_0004AJ_0002ENSG00000123977ENST00000309931ENST00000373666ENST00000440997ENST00000454999ENST00000472604ENSG00000153820ENST00000344657ENST00000392056ENST00000490603CIL_0004AJ_0003ENSMUSG00000026163ENSMUST00000053075ENSMUST00000159078ENSMUST00000160237ENSMUST00000160567ENSMUST00000160953ENSMUSG00000053161ENSMUST00000065403ENSMUST00000065436ENSMUST00000113436ENSMUST00000133079ENSMUST00000149342ENSMUSG00000079140ENSMUST00000159051ENSMUSG00000101896ENSMUST00000178732
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AJ_0001ENSDARG00000017429ENSDART00000040669ENSDARG00000021462ENSDART00000024202ENSDART00000142790CIL_0004AJ_0002ENSG00000123977ENST00000309931ENST00000373666ENST00000440997ENST00000454999ENST00000472604ENSG00000153820ENST00000344657ENST00000392056ENST00000490603CIL_0004AJ_0003ENSMUSG00000026163ENSMUST00000053075ENSMUST00000159078ENSMUST00000160237ENSMUST00000160567ENSMUST00000160953ENSMUSG00000053161ENSMUST00000065403ENSMUST00000065436ENSMUST00000113436ENSMUST00000133079ENSMUST00000149342ENSMUSG00000079140ENSMUST00000159051ENSMUSG00000101896ENSMUST00000178732
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000017429 ENSDART00000040669 N/A N/A N/A 3.660±0.44 N/A N/A 0.667±0.00 0.109±0.00 0.029±0.00 N/A 0.643±0.00 N/A N/A N/A
ENSDARG00000021462 ENSDART00000024202 N/A N/A N/A 0.764±0.53 N/A N/A 0.162±0.00 3.280±1.38 N/A N/A 0.207±0.00 N/A N/A N/A
ENSDART00000142790 N/A N/A N/A 0.341±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123977 ENST00000309931 0.005±0.00 0.230±0.00 N/A 0.986±0.46 0.097±0.00 0.010±0.00 0.011±0.00 N/A N/A 2.062±0.84 N/A 1.247±1.14 0.692±0.64 38.627±13.40
ENST00000373666 0.024±0.00 N/A N/A N/A 0.050±0.00 0.023±0.00 0.023±0.00 0.060±0.00 N/A N/A N/A N/A 0.281±0.19 N/A
ENST00000440997 N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454999 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.069±0.00 N/A 0.421±0.00 N/A N/A
ENST00000472604 N/A N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000153820 ENST00000344657 N/A N/A 0.013±0.00 3.172±0.49 0.027±0.02 0.080±0.04 11.900±7.70 0.017±0.00 0.013±0.01 0.134±0.00 0.005±0.00 1.042±0.31 0.055±0.00 0.066±0.03
ENST00000392056 N/A 0.128±0.00 N/A 1.103±0.52 0.136±0.00 N/A 3.081±0.00 0.048±0.00 N/A N/A N/A 0.376±0.00 N/A 0.034±0.00
ENST00000490603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.158±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026163 ENSMUST00000053075 0.085±0.00 N/A N/A 5.966±0.00 0.014±0.00 0.084±0.04 0.153±0.06 N/A 0.002±0.00 0.111±0.00 0.016±0.00 0.010±0.00 0.012±0.00 0.741±0.00
ENSMUST00000159078 0.232±0.17 N/A 0.010±0.00 2.635±1.42 0.018±0.00 0.078±0.02 0.153±0.01 0.017±0.01 0.008±0.00 0.097±0.00 0.045±0.02 0.084±0.06 0.030±0.02 4.798±2.27
ENSMUST00000160237 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.168±0.00 N/A 0.655±0.00 N/A 0.301±0.02 N/A N/A
ENSMUST00000160567 N/A N/A N/A N/A N/A 0.505±0.20 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160953 0.016±0.00 0.591±0.14 N/A 1.301±0.00 N/A 0.021±0.00 N/A 0.016±0.00 0.007±0.00 0.125±0.02 0.020±0.00 0.084±0.06 N/A N/A
ENSMUSG00000053161 ENSMUST00000065403 N/A N/A 0.312±0.00 0.295±0.00 N/A N/A N/A 0.151±0.07 N/A 0.164±0.00 N/A 0.851±0.41 N/A 7.968±1.65
ENSMUST00000065436 0.049±0.00 N/A 0.948±0.05 N/A 0.035±0.00 N/A 0.038±0.01 0.127±0.03 0.009±0.00 0.499±0.00 0.039±0.00 1.146±0.39 0.031±0.03 4.375±0.53
ENSMUST00000113436 0.046±0.01 N/A N/A N/A N/A 0.102±0.03 0.023±0.00 N/A 0.008±0.00 0.190±0.00 N/A 0.524±0.13 0.039±0.02 3.342±0.00
ENSMUST00000133079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.121±0.54 N/A N/A
ENSMUST00000149342 N/A N/A 0.621±0.00 0.357±0.12 N/A N/A N/A 0.272±0.05 0.019±0.00 0.652±0.21 N/A 0.997±0.11 0.012±0.00 2.831±0.18
ENSMUSG00000079140 ENSMUST00000159051 N/A N/A N/A 0.056±0.03 N/A N/A 0.053±0.00 N/A N/A N/A N/A N/A 0.007±0.00 0.183±0.17
ENSMUSG00000101896 ENSMUST00000178732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.062±0.01 11.891±15.20

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