C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SPHK1 interactor, AKAP domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026163 Sphkap 10090 - 1:83254139-83408200 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000053075 Sphkap-003 83265127-83408165 retained_intron
  ENSMUST00000159078 Sphkap-002 83255442-83279165 protein_coding
  ENSMUST00000160237 Sphkap-005 83339146-83408139 retained_intron
  ENSMUST00000160567 Sphkap-004 83384843-83408165 retained_intron
  ENSMUST00000160953 Sphkap-001 83254139-83408200 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000053075ENSMUST00000159078ENSMUST00000160237ENSMUST00000160567ENSMUST00000160953
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000053075 0.085±0.00 N/A N/A 5.966±0.00 0.014±0.00 0.084±0.04 0.153±0.06 N/A 0.002±0.00 0.111±0.00 0.016±0.00 0.010±0.00 0.012±0.00 0.741±0.00
ENSMUST00000159078 0.232±0.17 N/A 0.010±0.00 2.635±1.42 0.018±0.00 0.078±0.02 0.153±0.01 0.017±0.01 0.008±0.00 0.097±0.00 0.045±0.02 0.084±0.06 0.030±0.02 4.798±2.27
ENSMUST00000160237 N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.168±0.00 N/A 0.655±0.00 N/A 0.301±0.02 N/A N/A
ENSMUST00000160567 N/A N/A N/A N/A N/A 0.505±0.20 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160953 0.016±0.00 0.591±0.14 N/A 1.301±0.00 N/A 0.021±0.00 N/A 0.016±0.00 0.007±0.00 0.125±0.02 0.020±0.00 0.084±0.06 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004AJ CIL_0004AJ_0003 CGP 1:83159752-83408200
CIL_0004AK CIL_0004AK_0003 CGP 1:83254139-84364180

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0030018 IDA Z disc
GO:0051018 IPI protein kinase A binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017429 sphkap SPHK1 interactor, AKAP domain containing protein_coding Danio_rerio
ENSG00000153820 SPHKAP SPHK1 interactor, AKAP domain containing protein_coding Homo_sapiens

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