C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglucomutase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154330 PGM5 9606 + 9:68328308-68531061 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000396392 PGM5-004 68356899-68466555 protein_coding
  ENST00000396396 PGM5-001 68356899-68531061 protein_coding
  ENST00000431583 PGM5-003 68357230-68391701 protein_coding
  ENST00000472639 PGM5-002 68464521-68499285 processed_transcript
  ENST00000496758 PGM5-005 68496825-68531061 retained_intron
  ENST00000587852 PGM5-007 68396524-68406344 processed_transcript
  ENST00000604870 PGM5-006 68328308-68406345 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396396ENST00000472639ENST00000496758
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396396 5.535±0.00 10.655±0.00 1.452±0.00 0.857±0.11 5.555±1.69 26.535±16.03 12.794±7.12 4.536±0.00 24.137±23.90 3.720±1.41 6.788±5.09 6.076±5.39 3.223±1.87 6.496±4.40
ENST00000472639 N/A N/A 6.849±0.00 N/A 23.724±0.00 28.977±0.00 14.399±0.00 3.047±0.00 108.148±0.00 N/A 14.854±0.00 N/A N/A N/A
ENST00000496758 N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050R CIL_00050R_0002 CGP 9:68302867-68531061

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001725 IDA stress fiber
GO:0005198 NAS structural molecule activity
GO:0005515 IEA protein binding
GO:0005913 IDA cell-cell adherens junction
GO:0005914 IDA spot adherens junction
GO:0005925 IDA focal adhesion
GO:0005975 IEA carbohydrate metabolic process
GO:0007155 IEA cell adhesion
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0014704 IDA intercalated disc
GO:0016010 ISS dystrophin-associated glycoprotein complex
GO:0016868 IEA intramolecular transferase activity, phosphotransferases
GO:0030018 IBA Z disc
GO:0030055 IEA cell-substrate junction
GO:0042383 IDA sarcolemma
GO:0043034 IDA costamere

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060745 pgm5 phosphoglucomutase 5 protein_coding Danio_rerio
ENSMUSG00000041731 Pgm5 phosphoglucomutase 5 protein_coding Mus_musculus

Loading