C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoglucomutase 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041731 Pgm5 10090 - 19:24683016-24861855 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000047666 Pgm5-001 24683016-24861855 protein_coding
  ENSMUST00000129127 Pgm5-003 24816231-24861652 retained_intron
  ENSMUST00000133692 Pgm5-004 24684551-24763078 processed_transcript
  ENSMUST00000150339 Pgm5-002 24816130-24861687 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047666ENSMUST00000129127ENSMUST00000133692ENSMUST00000150339
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047666 22.863±18.42 7.059±2.81 98.137±1.99 1.383±0.80 2.467±0.87 40.953±7.22 19.339±2.01 4.047±0.71 0.262±0.16 13.565±2.59 2.910±0.79 29.308±14.97 1.617±2.57 1.287±1.10
ENSMUST00000129127 N/A N/A N/A N/A 0.875±0.00 N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A
ENSMUST00000133692 N/A N/A N/A N/A 3.128±1.28 N/A N/A N/A 0.356±0.00 N/A N/A N/A 0.527±0.00 N/A
ENSMUST00000150339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00 0.194±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086N CIL_00086N_0002 VISTA 19:24151986-24754280
CIL_0009AF CIL_0009AF_0002 VISTA 19:24645396-25246544

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001725 IBA stress fiber
GO:0005515 IPI protein binding
GO:0005913 IEA cell-cell adherens junction
GO:0005914 IBA spot adherens junction
GO:0005925 IBA focal adhesion
GO:0006006 IEA glucose metabolic process
GO:0007155 IEA cell adhesion
GO:0009898 IBA cytoplasmic side of plasma membrane
GO:0014704 IBA intercalated disc
GO:0016010 IDA dystrophin-associated glycoprotein complex
GO:0030018 IDA Z disc
GO:0030055 IDA cell-substrate junction
GO:0042383 IDA sarcolemma
GO:0043034 IBA costamere

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060745 pgm5 phosphoglucomutase 5 protein_coding Danio_rerio
ENSG00000154330 PGM5 phosphoglucomutase 5 protein_coding Homo_sapiens

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