C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoglucomutase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396392 PGM5-004 ENSG00000154330 9606 + 9:68356899-68466555 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050R CIL_00050R_0002 CGP 9:68302867-68531061

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0001725 IDA stress fiber
GO:0005198 NAS structural molecule activity
GO:0005913 IDA cell-cell adherens junction
GO:0005914 IDA spot adherens junction
GO:0005925 IDA focal adhesion
GO:0005975 IEA carbohydrate metabolic process
GO:0007155 IEA cell adhesion
GO:0009898 IDA cytoplasmic side of plasma membrane
GO:0014704 IDA intercalated disc
GO:0016010 ISS dystrophin-associated glycoprotein complex
GO:0016868 IEA intramolecular transferase activity, phosphotransferases
GO:0030018 IBA Z disc
GO:0042383 IDA sarcolemma
GO:0043034 IDA costamere

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000047666 Pgm5-001 protein_coding Mus_musculus 0 1644
ENSMUST00000129127 Pgm5-003 retained_intron Mus_musculus 0 1040
ENSMUST00000150339 Pgm5-002 retained_intron Mus_musculus 0 512
ENSMUST00000133692 Pgm5-004 processed_transcript Mus_musculus 2e-36 158

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