C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: diphthamide biosynthesis 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000154813 DPH3 9606 - 3:16257978-16264972 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285082 DPH3-003 16259910-16264777 processed_transcript
  ENST00000383775 DPH3-002 16257979-16264969 protein_coding
  ENST00000462982 DPH3-004 16260424-16264587 processed_transcript
  ENST00000488423 DPH3-001 16257978-16264972 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000285082ENST00000383775ENST00000462982ENST00000488423
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000285082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.104±0.00
ENST00000383775 2.088±0.00 1.196±0.00 N/A N/A 1.543±0.67 3.784±0.00 1.151±0.27 0.964±0.69 0.883±0.54 1.320±0.21 1.165±0.67 2.176±1.13 2.547±1.53 1.537±0.04
ENST00000462982 N/A N/A N/A N/A N/A N/A N/A N/A 2.711±0.00 5.769±0.00 N/A N/A 4.622±0.23 N/A
ENST00000488423 3.130±0.00 3.145±0.00 1.046±0.00 2.222±0.39 2.783±1.59 1.529±0.38 2.231±2.03 3.427±2.36 2.301±0.08 2.347±0.66 3.786±2.68 1.649±0.36 1.772±0.53 3.617±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HN CIL_0004HN_0001 CGP 3:16174649-16264972
CIL_0004HO CIL_0004HO_0001 CGP 3:16257978-16350299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0017183 ISS peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0046872 IEA metal ion binding
GO:0050709 IDA negative regulation of protein secretion
GO:0051099 IDA positive regulation of binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043360 dph3 diphthamide biosynthesis 3 protein_coding Danio_rerio
ENSMUSG00000021905 Dph3 diphthamine biosynthesis 3 protein_coding Mus_musculus

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