C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ras homolog family member C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000155366 RHOC 9606 - 1:112701106-112707434 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000285735 RHOC-002 112701133-112707127 protein_coding
  ENST00000339083 RHOC-001 112701106-112707403 protein_coding
  ENST00000369632 RHOC-009 112701520-112707079 protein_coding
  ENST00000369633 RHOC-201 112701127-112707056 protein_coding
  ENST00000369636 RHOC-005 112701325-112707120 protein_coding
  ENST00000369637 RHOC-004 112701313-112707125 protein_coding
  ENST00000369638 RHOC-012 112701275-112707135 protein_coding
  ENST00000369642 RHOC-003 112701131-112707434 protein_coding
  ENST00000414971 RHOC-013 112703001-112704921 protein_coding
  ENST00000425265 RHOC-008 112701556-112707056 protein_coding
  ENST00000436685 RHOC-010 112702588-112707102 protein_coding
  ENST00000468093 RHOC-007 112701210-112707102 nonsense_mediated_decay
  ENST00000473074 RHOC-014 112701338-112703653 retained_intron
  ENST00000478447 RHOC-015 112703493-112707114 retained_intron
  ENST00000484054 RHOC-006 112702999-112707116 protein_coding
  ENST00000484280 RHOC-011 112701437-112707133 nonsense_mediated_decay
  ENST00000527563 RHOC-017 112704640-112707127 retained_intron
  ENST00000528831 RHOC-016 112702671-112707159 nonsense_mediated_decay
  ENST00000534717 RHOC-018 112701614-112704997 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339083ENST00000369632ENST00000369633ENST00000369636ENST00000369637ENST00000369638ENST00000369642ENST00000425265ENST00000436685ENST00000534717
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339083 N/A N/A N/A N/A 3.579±0.00 23.027±16.11 9.283±7.49 42.655±0.00 13.214±0.00 N/A 4.890±0.00 3.026±0.00 33.514±0.00 N/A
ENST00000369632 N/A N/A N/A N/A N/A 5.818±0.00 N/A N/A 5.832±0.00 6.841±0.00 N/A N/A N/A N/A
ENST00000369633 N/A N/A N/A 5.713±0.00 N/A N/A N/A N/A 5.436±0.00 2.153±0.00 N/A 29.944±22.75 146.005±41.87 N/A
ENST00000369636 112.236±0.00 56.270±0.00 N/A N/A 80.196±0.00 72.699±0.00 10.052±7.37 65.395±0.00 N/A 151.776±0.00 22.047±0.00 5.314±0.00 N/A 57.414±0.00
ENST00000369637 208.063±0.00 74.809±0.00 7.124±0.00 66.472±0.00 46.567±42.52 73.795±67.91 23.364±0.00 69.306±64.95 18.877±0.00 121.639±0.00 N/A 66.617±37.87 97.125±17.81 77.602±48.70
ENST00000369638 N/A 38.333±0.00 N/A N/A 35.803±0.00 N/A N/A N/A 3.375±0.00 N/A N/A N/A N/A N/A
ENST00000369642 N/A 31.615±0.00 N/A 3.148±0.00 28.709±22.86 N/A 11.959±10.28 33.147±0.00 9.346±0.00 128.217±125.87 19.485±0.00 128.857±27.19 144.072±12.95 61.937±0.00
ENST00000425265 N/A N/A 4.509±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 144.347±0.00 77.392±0.00 41.556±0.00
ENST00000436685 N/A N/A N/A 7.710±0.00 12.570±0.00 8.917±0.00 6.763±0.00 N/A 8.284±0.00 N/A N/A N/A 96.091±0.00 N/A
ENST00000534717 N/A N/A N/A N/A N/A 8.559±0.00 5.189±0.00 12.014±0.00 N/A 8.372±0.00 N/A N/A 54.878±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006U6 CIL_0006U6_0002 CGP 1:112673141-112707434
CIL_000878 CIL_000878_0001 VISTA 1:112697401-113299438
CIL_0009BY CIL_0009BY_0001 VISTA 1:112697434-113299398

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000910 IDA cytokinesis
GO:0003924 IEA GTPase activity
GO:0004871 IMP signal transducer activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0005886 TAS plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0007165 IEA signal transduction
GO:0007264 IEA:TAS small GTPase mediated signal transduction
GO:0007411 TAS axon guidance
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0032154 IDA cleavage furrow
GO:0043123 IMP positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043297 IDA apical junction assembly
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018328 rhoad ras homolog gene family, member Ad protein_coding Danio_rerio
ENSDARG00000021309 rhoae ras homolog gene family, member Ae protein_coding Danio_rerio
ENSMUSG00000002233 Rhoc ras homolog gene family, member C protein_coding Mus_musculus

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