C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sideroflexin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156398 SFXN2 9606 + 10:102714538-102743492 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369893 SFXN2-001 102714540-102743492 protein_coding
  ENST00000459894 SFXN2-002 102714636-102739189 nonsense_mediated_decay
  ENST00000480358 SFXN2-005 102714627-102739195 nonsense_mediated_decay
  ENST00000602287 SFXN2-014 102714601-102728576 retained_intron
  ENST00000602439 SFXN2-007 102714636-102728485 protein_coding
  ENST00000602544 SFXN2-012 102714631-102728511 nonsense_mediated_decay
  ENST00000602647 SFXN2-006 102714635-102726657 protein_coding
  ENST00000602660 SFXN2-015 102714659-102729506 retained_intron
  ENST00000602670 SFXN2-011 102714638-102727769 nonsense_mediated_decay
  ENST00000602764 SFXN2-008 102714636-102728503 protein_coding
  ENST00000602785 SFXN2-009 102714636-102727702 processed_transcript
  ENST00000602831 SFXN2-010 102714538-102729390 protein_coding
  ENST00000602868 SFXN2-013 102726500-102729392 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369893ENST00000459894ENST00000480358ENST00000602785
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369893 0.136±0.00 0.435±0.00 2.468±0.00 0.071±0.00 N/A N/A N/A 0.836±0.05 0.148±0.00 N/A N/A 0.350±0.13 0.312±0.21 N/A
ENST00000459894 0.717±0.00 1.441±0.00 3.185±0.00 N/A 0.668±0.00 N/A 0.387±0.00 5.359±0.00 1.713±1.30 0.596±0.00 0.094±0.00 2.026±1.08 1.118±0.24 N/A
ENST00000480358 0.715±0.00 2.354±0.00 N/A 0.239±0.00 0.800±0.00 0.496±0.00 N/A 3.798±0.98 N/A N/A N/A 3.163±0.00 2.205±1.93 0.407±0.19
ENST00000602785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.812±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0001 VISTA 10:102469546-103070739
CIL_0001HQ CIL_0001HQ_0002 CGP 10:102673731-102743492
CIL_00065W CIL_00065W_0001 CGP 10:102714538-102816267

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017960 sfxn2 sideroflexin 2 protein_coding Danio_rerio
ENSMUSG00000025036 Sfxn2 sideroflexin 2 protein_coding Mus_musculus

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