C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00065W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156398-ENSG00000166272 CGP 9606 10:102714538-102816267
GeneTranscriptPositionBiotype
ENSG00000156398 (SFXN2)
sideroflexin 2 		ENST00000369893 (SFXN2-001) 102714540-102743492 protein_coding
ENST00000459894 (SFXN2-002) 102714636-102739189 nonsense_mediated_decay
ENST00000480358 (SFXN2-005) 102714627-102739195 nonsense_mediated_decay
ENST00000602287 (SFXN2-014) 102714601-102728576 retained_intron
ENST00000602439 (SFXN2-007) 102714636-102728485 protein_coding
ENST00000602544 (SFXN2-012) 102714631-102728511 nonsense_mediated_decay
ENST00000602647 (SFXN2-006) 102714635-102726657 protein_coding
ENST00000602660 (SFXN2-015) 102714659-102729506 retained_intron
ENST00000602670 (SFXN2-011) 102714638-102727769 nonsense_mediated_decay
ENST00000602764 (SFXN2-008) 102714636-102728503 protein_coding
ENST00000602785 (SFXN2-009) 102714636-102727702 processed_transcript
ENST00000602831 (SFXN2-010) 102714538-102729390 protein_coding
ENST00000602868 (SFXN2-013) 102726500-102729392 protein_coding
ENSG00000166272 (WBP1L)
WW domain binding protein 1-like 		ENST00000369889 (WBP1L-001) 102776249-102816267 protein_coding
ENST00000448841 (WBP1L-201) 102743970-102816240 protein_coding
ENSG00000252994 (RNU6-1231P)
RNA, U6 small nuclear 1231, pseudogene 		ENST00000517185 (RNU6-1231P-201) 102803929-102804031 snRNA
CIL_00065W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025036-ENSMUSG00000047731 CGP 10090 19:46573365-46657389
GeneTranscriptPositionBiotype
ENSMUSG00000025036 (Sfxn2)
sideroflexin 2 		ENSMUST00000026011 (Sfxn2-201) 46573365-46596898 protein_coding
ENSMUSG00000047731 (Wbp1l)
WW domain binding protein 1 like 		ENSMUST00000099376 (Wbp1l-002) 46599114-46657382 protein_coding
ENSMUST00000111855 (Wbp1l-003) 46623401-46657385 protein_coding
ENSMUST00000132202 (Wbp1l-004) 46599113-46657385 nonsense_mediated_decay
ENSMUST00000138302 (Wbp1l-001) 46599084-46657389 protein_coding
ENSMUST00000156649 (Wbp1l-006) 46623401-46652522 processed_transcript
ENSMUST00000175937 (Wbp1l-005) 46599124-46644555 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065W_0001ENSG00000156398ENST00000369893ENST00000459894ENST00000480358ENST00000602287ENST00000602439ENST00000602544ENST00000602647ENST00000602660ENST00000602670ENST00000602764ENST00000602785ENST00000602831ENST00000602868ENSG00000166272ENST00000369889ENST00000448841ENSG00000252994ENST00000517185CIL_00065W_0002ENSMUSG00000025036ENSMUST00000026011ENSMUSG00000047731ENSMUST00000099376ENSMUST00000111855ENSMUST00000132202ENSMUST00000138302ENSMUST00000156649ENSMUST00000175937
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065W_0001ENSG00000156398ENST00000369893ENST00000459894ENST00000480358ENST00000602785ENSG00000166272ENST00000369889ENST00000448841ENSG00000252994ENST00000517185CIL_00065W_0002ENSMUSG00000025036ENSMUST00000026011ENSMUSG00000047731ENSMUST00000099376ENSMUST00000111855ENSMUST00000132202ENSMUST00000138302
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000156398 ENST00000369893 0.136±0.00 0.435±0.00 2.468±0.00 0.071±0.00 N/A N/A N/A 0.836±0.05 0.148±0.00 N/A N/A 0.350±0.13 0.312±0.21 N/A
ENST00000459894 0.717±0.00 1.441±0.00 3.185±0.00 N/A 0.668±0.00 N/A 0.387±0.00 5.359±0.00 1.713±1.30 0.596±0.00 0.094±0.00 2.026±1.08 1.118±0.24 N/A
ENST00000480358 0.715±0.00 2.354±0.00 N/A 0.239±0.00 0.800±0.00 0.496±0.00 N/A 3.798±0.98 N/A N/A N/A 3.163±0.00 2.205±1.93 0.407±0.19
ENST00000602287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602785 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.812±0.00 N/A N/A N/A
ENST00000602831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166272 ENST00000369889 5.853±0.00 8.794±0.00 1.558±0.00 1.245±0.22 9.367±0.00 2.915±1.51 1.852±1.00 4.201±0.26 1.229±0.00 2.782±0.28 10.323±6.27 9.266±1.13 11.766±10.86 8.796±4.36
ENST00000448841 20.407±0.00 14.255±0.00 N/A 4.227±3.33 12.726±10.95 8.142±6.18 6.065±0.00 6.991±5.97 8.901±7.54 12.088±10.88 14.131±0.00 9.113±5.63 11.391±2.91 6.630±4.86
ENSG00000252994 ENST00000517185 N/A 0.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025036 ENSMUST00000026011 2.694±0.45 1.165±0.52 1.503±0.08 3.258±1.98 1.586±0.53 1.337±0.35 0.232±0.05 9.340±1.07 8.312±2.61 1.752±0.81 1.165±0.38 2.196±0.97 2.122±1.59 0.487±0.24
ENSMUSG00000047731 ENSMUST00000099376 15.178±2.77 36.970±6.05 13.258±2.04 5.573±3.90 11.414±2.80 14.837±2.32 4.110±0.73 14.638±1.54 28.592±19.77 11.111±0.91 2.411±0.00 15.317±6.55 25.794±14.00 2.324±1.08
ENSMUST00000111855 5.605±0.27 32.724±4.99 3.975±0.00 4.689±0.00 4.690±0.45 N/A 8.596±0.53 N/A 3.491±2.16 3.284±0.17 18.179±4.91 8.829±2.78 10.516±7.22 1.959±0.00
ENSMUST00000132202 N/A N/A N/A N/A N/A 3.016±0.00 N/A N/A N/A N/A 3.487±0.40 3.408±0.83 N/A N/A
ENSMUST00000138302 13.891±3.72 16.341±5.35 11.149±2.78 6.651±3.00 8.497±1.73 5.672±1.11 3.194±0.00 9.732±1.88 16.412±11.52 4.114±1.46 3.260±0.00 14.656±4.22 8.347±3.12 5.187±0.20
ENSMUST00000156649 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000175937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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