C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sideroflexin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000459894 SFXN2-002 ENSG00000156398 9606 + 10:102714636-102739189 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverLungMuscleOvaryPlacentaENST00000459894
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000459894 0.717±0.00 1.441±0.00 3.185±0.00 0.668±0.00 0.387±0.00 5.359±0.00 1.713±1.30 0.596±0.00 0.094±0.00 2.026±1.08 1.118±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MQ CIL_0008MQ_0001 VISTA 10:102469546-103070739
CIL_0001HQ CIL_0001HQ_0002 CGP 10:102673731-102743492
CIL_00065W CIL_00065W_0001 CGP 10:102714538-102816267

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026011 Sfxn2-201 protein_coding Mus_musculus 0 527

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