C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156508 EEF1A1 9606 - 6:73515750-73523797 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000309268 EEF1A1-009 73517515-73521588 protein_coding
  ENST00000316292 EEF1A1-001 73515750-73521018 protein_coding
  ENST00000331523 EEF1A1-004 73517521-73521721 protein_coding
  ENST00000356303 EEF1A1-015 73519117-73521900 protein_coding
  ENST00000455918 EEF1A1-003 73519341-73523797 protein_coding
  ENST00000488500 EEF1A1-011 73518794-73520059 retained_intron
  ENST00000490569 EEF1A1-008 73517519-73520059 retained_intron
  ENST00000491404 EEF1A1-014 73517515-73519417 processed_transcript
  ENST00000495333 EEF1A1-002 73518566-73520059 retained_intron
  ENST00000610520 EEF1A1-201 73515752-73521032 protein_coding
  ENST00000615060 EEF1A1-202 73515752-73521032 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309268ENST00000331523ENST00000356303ENST00000455918ENST00000488500ENST00000490569ENST00000491404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309268 307.655±0.00 228.020±0.00 186.694±0.00 154.820±9.28 333.613±143.17 539.682±114.59 53.488±0.00 241.310±80.06 637.844±0.00 468.401±0.00 40.776±0.00 404.623±136.81 334.313±0.00 172.107±85.23
ENST00000331523 959.523±0.00 1015.030±0.00 152.803±0.00 227.456±0.00 542.432±255.29 700.484±286.66 116.446±80.96 718.550±0.00 N/A 1896.110±0.00 141.083±116.06 1710.618±1934.81 3072.155±250.01 336.874±225.02
ENST00000356303 N/A N/A 450.112±0.00 N/A N/A N/A 69.064±0.00 N/A N/A N/A N/A N/A 831.710±0.00 N/A
ENST00000455918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1703.340±0.00 1961.660±0.00 608.512±0.00
ENST00000488500 N/A N/A N/A 118.702±0.00 292.655±0.00 N/A N/A N/A N/A 459.064±0.00 N/A 869.588±0.00 N/A N/A
ENST00000490569 N/A N/A N/A 68.113±0.00 N/A N/A N/A N/A N/A 234.754±0.00 N/A 393.650±0.00 516.078±0.00 119.854±0.00
ENST00000491404 1517.920±0.00 1352.920±0.00 N/A 346.337±0.00 1116.160±0.00 1950.540±0.00 134.043±0.00 928.033±0.00 397.147±0.00 1098.980±0.00 163.358±0.00 N/A N/A 1236.920±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797
CIL_0006PR CIL_0006PR_0001 CGP 6:73515750-73654155

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 TAS:IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA:TAS GTP binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 ISS:IEA cytoplasm
GO:0005829 TAS cytosol
GO:0005853 TAS eukaryotic translation elongation factor 1 complex
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006412 TAS translation
GO:0006414 TAS:IEA translational elongation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0019901 IPI protein kinase binding
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome
GO:0071364 IDA cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039502 eef1a1a eukaryotic translation elongation factor 1 alpha 1a protein_coding Danio_rerio
ENSDARG00000069951 eef1a1b eukaryotic translation elongation factor 1 alpha 1b protein_coding Danio_rerio
ENSMUSG00000037742 Eef1a1 eukaryotic translation elongation factor 1 alpha 1 protein_coding Mus_musculus

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