C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000135297-ENSG00000156508 CGP 9606 6:73461578-73523797
GeneTranscriptPositionBiotype
ENSG00000135297 (MTO1)
mitochondrial tRNA translation optimization 1 		ENST00000370300 (MTO1-003) 73461765-73501452 protein_coding
ENST00000370305 (MTO1-007) 73461746-73500923 protein_coding
ENST00000370308 (MTO1-002) 73461765-73501096 retained_intron
ENST00000415228 (MTO1-005) 73461765-73501096 nonsense_mediated_decay
ENST00000415954 (MTO1-012) 73461578-73501096 protein_coding
ENST00000442897 (MTO1-014) 73461742-73479972 nonsense_mediated_decay
ENST00000445187 (MTO1-006) 73480000-73482534 nonsense_mediated_decay
ENST00000462039 (MTO1-004) 73461795-73501050 retained_intron
ENST00000466977 (MTO1-009) 73473553-73480171 retained_intron
ENST00000485082 (MTO1-008) 73466263-73471795 retained_intron
ENST00000487960 (MTO1-010) 73480166-73481028 retained_intron
ENST00000498286 (MTO1-001) 73461578-73509236 protein_coding
ENST00000518210 (MTO1-016) 73462143-73473411 processed_transcript
ENST00000520366 (MTO1-013) 73480063-73480762 processed_transcript
ENST00000521032 (MTO1-015) 73461747-73473474 nonsense_mediated_decay
ENST00000521156 (MTO1-019) 73482115-73501038 protein_coding
ENST00000522205 (MTO1-011) 73461778-73473532 nonsense_mediated_decay
ENST00000523763 (MTO1-017) 73482132-73500701 nonsense_mediated_decay
ENST00000524046 (MTO1-018) 73480296-73492325 nonsense_mediated_decay
ENSG00000156508 (EEF1A1)
eukaryotic translation elongation factor 1 alpha 1 		ENST00000309268 (EEF1A1-009) 73517515-73521588 protein_coding
ENST00000316292 (EEF1A1-001) 73515750-73521018 protein_coding
ENST00000331523 (EEF1A1-004) 73517521-73521721 protein_coding
ENST00000356303 (EEF1A1-015) 73519117-73521900 protein_coding
ENST00000455918 (EEF1A1-003) 73519341-73523797 protein_coding
ENST00000488500 (EEF1A1-011) 73518794-73520059 retained_intron
ENST00000490569 (EEF1A1-008) 73517519-73520059 retained_intron
ENST00000491404 (EEF1A1-014) 73517515-73519417 processed_transcript
ENST00000495333 (EEF1A1-002) 73518566-73520059 retained_intron
ENST00000610520 (EEF1A1-201) 73515752-73521032 protein_coding
ENST00000615060 (EEF1A1-202) 73515752-73521032 protein_coding
ENSG00000207023 (RNU6-975P)
RNA, U6 small nuclear 975, pseudogene 		ENST00000384296 (RNU6-975P-201) 73464073-73464177 snRNA
ENSG00000271986 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000607480 (Metazoa_SRP.1-226) 73487590-73487877 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0006PO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032342-ENSMUSG00000037742 CGP 10090 9:78448208-78489151
GeneTranscriptPositionBiotype
ENSMUSG00000032342 (Mto1)
mitochondrial translation optimization 1 homolog (S. cerevisiae) 		ENSMUST00000034896 (Mto1-001) 78448208-78474152 protein_coding
ENSMUST00000133002 (Mto1-005) 78464992-78475348 protein_coding
ENSMUST00000136478 (Mto1-004) 78470393-78473833 retained_intron
ENSMUST00000148238 (Mto1-007) 78448208-78474152 nonsense_mediated_decay
ENSMUST00000150850 (Mto1-002) 78448213-78450472 retained_intron
ENSMUST00000157051 (Mto1-006) 78464699-78470741 retained_intron
ENSMUSG00000037742 (Eef1a1)
eukaryotic translation elongation factor 1 alpha 1 		ENSMUST00000042235 (Eef1a1-001) 78478449-78481724 protein_coding
ENSMUST00000126614 (Eef1a1-006) 78479665-78480688 retained_intron
ENSMUST00000129380 (Eef1a1-004) 78478684-78479716 retained_intron
ENSMUST00000143570 (Eef1a1-007) 78478912-78479501 processed_transcript
ENSMUST00000144523 (Eef1a1-005) 78479278-78480688 retained_intron
ENSMUST00000150960 (Eef1a1-002) 78479480-78480499 retained_intron
ENSMUST00000154207 (Eef1a1-008) 78479649-78489151 protein_coding
ENSMUST00000156988 (Eef1a1-003) 78479915-78480841 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PO_0001ENSG00000135297ENST00000370300ENST00000370305ENST00000370308ENST00000415228ENST00000415954ENST00000445187ENST00000462039ENST00000498286ENST00000521156ENST00000522205ENSG00000156508ENST00000309268ENST00000331523ENST00000356303ENST00000455918ENST00000488500ENST00000490569ENST00000491404ENSG00000207023ENST00000384296ENSG00000271986ENST00000607480CIL_0006PO_0002ENSMUSG00000032342ENSMUST00000034896ENSMUST00000148238ENSMUST00000150850ENSMUSG00000037742ENSMUST00000042235ENSMUST00000129380ENSMUST00000143570ENSMUST00000156988
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000135297 ENST00000370300 1.049±0.00 1.783±0.00 N/A N/A 1.234±0.00 N/A 0.997±0.00 N/A 1.652±0.00 N/A N/A 1.986±0.00 0.984±0.05 N/A
ENST00000370305 2.198±0.00 2.685±0.00 N/A 2.972±0.00 1.785±0.00 3.287±0.00 2.118±0.00 3.890±0.00 2.174±0.00 2.184±0.55 2.103±1.16 2.013±0.47 0.861±0.00 10.518±0.00
ENST00000370308 N/A N/A N/A 4.255±0.00 1.010±0.00 4.331±0.00 1.323±0.00 4.829±0.00 3.017±0.00 N/A 1.033±0.00 6.997±0.00 1.625±0.33 12.013±0.00
ENST00000415228 N/A 2.093±0.00 N/A N/A 1.196±0.24 1.207±0.00 1.319±0.00 3.221±0.00 1.726±0.00 1.398±0.00 N/A 2.476±0.23 1.327±0.02 7.586±0.00
ENST00000415954 0.971±0.00 N/A 2.711±0.00 1.735±0.05 1.146±0.00 N/A 0.507±0.00 1.702±0.06 N/A 1.604±0.00 0.581±0.00 1.820±0.00 N/A N/A
ENST00000442897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445187 N/A N/A 3.297±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 8.708±0.00 N/A N/A
ENST00000462039 N/A N/A 0.645±0.00 N/A N/A N/A 0.588±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000466977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498286 N/A N/A N/A 0.452±0.00 N/A 0.240±0.00 0.257±0.00 0.421±0.12 0.282±0.01 0.323±0.00 0.167±0.00 0.276±0.00 N/A N/A
ENST00000518210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521156 N/A N/A N/A N/A N/A 2.182±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.704±0.00 21.758±0.00 7.436±0.00 40.353±0.00
ENST00000523763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156508 ENST00000309268 307.655±0.00 228.020±0.00 186.694±0.00 154.820±9.28 333.613±143.17 539.682±114.59 53.488±0.00 241.310±80.06 637.844±0.00 468.401±0.00 40.776±0.00 404.623±136.81 334.313±0.00 172.107±85.23
ENST00000316292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000331523 959.523±0.00 1015.030±0.00 152.803±0.00 227.456±0.00 542.432±255.29 700.484±286.66 116.446±80.96 718.550±0.00 N/A 1896.110±0.00 141.083±116.06 1710.618±1934.81 3072.155±250.01 336.874±225.02
ENST00000356303 N/A N/A 450.112±0.00 N/A N/A N/A 69.064±0.00 N/A N/A N/A N/A N/A 831.710±0.00 N/A
ENST00000455918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1703.340±0.00 1961.660±0.00 608.512±0.00
ENST00000488500 N/A N/A N/A 118.702±0.00 292.655±0.00 N/A N/A N/A N/A 459.064±0.00 N/A 869.588±0.00 N/A N/A
ENST00000490569 N/A N/A N/A 68.113±0.00 N/A N/A N/A N/A N/A 234.754±0.00 N/A 393.650±0.00 516.078±0.00 119.854±0.00
ENST00000491404 1517.920±0.00 1352.920±0.00 N/A 346.337±0.00 1116.160±0.00 1950.540±0.00 134.043±0.00 928.033±0.00 397.147±0.00 1098.980±0.00 163.358±0.00 N/A N/A 1236.920±0.00
ENST00000495333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000615060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207023 ENST00000384296 N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00
ENSG00000271986 ENST00000607480 N/A 1.820±0.00 N/A 2.674±0.00 0.724±0.00 1.238±0.00 0.504±0.00 0.710±0.00 0.206±0.00 0.899±0.00 0.068±0.00 N/A N/A 0.565±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032342 ENSMUST00000034896 8.109±0.72 8.989±1.86 6.213±1.17 7.487±0.71 7.717±1.74 4.288±1.58 7.927±0.76 10.621±0.79 8.078±2.18 3.602±1.04 7.772±0.51 6.016±2.51 5.958±2.23 6.810±1.30
ENSMUST00000133002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148238 N/A 6.692±1.13 N/A N/A 1.697±0.58 2.891±0.66 1.159±0.08 N/A 3.563±1.23 3.426±0.00 N/A 5.939±2.01 N/A N/A
ENSMUST00000150850 N/A 41.518±0.00 N/A N/A 9.406±0.00 N/A N/A N/A N/A N/A N/A 8.629±0.00 N/A N/A
ENSMUST00000157051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037742 ENSMUST00000042235 1397.140±422.62 536.095±168.56 2937.795±141.39 1502.172±780.77 1079.881±458.95 1178.331±494.14 305.828±73.56 1541.375±247.14 1785.707±722.86 1056.142±294.88 118.940±27.01 1381.666±961.05 1506.008±848.89 693.002±282.71
ENSMUST00000126614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129380 N/A 291.424±81.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143570 N/A N/A N/A 991.706±0.00 1169.620±0.00 N/A N/A N/A N/A N/A N/A 3897.380±0.00 2784.950±1234.47 811.418±0.00
ENSMUST00000144523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156988 N/A N/A N/A 763.187±0.00 N/A N/A N/A N/A N/A N/A N/A 2882.150±0.00 1629.160±560.20 697.078±0.00

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