C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation elongation factor 1 alpha 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037742 Eef1a1 10090 - 9:78478449-78489151 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042235 Eef1a1-001 78478449-78481724 protein_coding
  ENSMUST00000126614 Eef1a1-006 78479665-78480688 retained_intron
  ENSMUST00000129380 Eef1a1-004 78478684-78479716 retained_intron
  ENSMUST00000143570 Eef1a1-007 78478912-78479501 processed_transcript
  ENSMUST00000144523 Eef1a1-005 78479278-78480688 retained_intron
  ENSMUST00000150960 Eef1a1-002 78479480-78480499 retained_intron
  ENSMUST00000154207 Eef1a1-008 78479649-78489151 protein_coding
  ENSMUST00000156988 Eef1a1-003 78479915-78480841 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042235ENSMUST00000129380ENSMUST00000143570ENSMUST00000156988
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042235 1397.140±422.62 536.095±168.56 2937.795±141.39 1502.172±780.77 1079.881±458.95 1178.331±494.14 305.828±73.56 1541.375±247.14 1785.707±722.86 1056.142±294.88 118.940±27.01 1381.666±961.05 1506.008±848.89 693.002±282.71
ENSMUST00000129380 N/A 291.424±81.71 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143570 N/A N/A N/A 991.706±0.00 1169.620±0.00 N/A N/A N/A N/A N/A N/A 3897.380±0.00 2784.950±1234.47 811.418±0.00
ENSMUST00000156988 N/A N/A N/A 763.187±0.00 N/A N/A N/A N/A N/A N/A N/A 2882.150±0.00 1629.160±560.20 697.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0002 CGP 9:78448208-78489151
CIL_0006PR CIL_0006PR_0002 CGP 9:78478449-78588041

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005615 IEA extracellular space
GO:0005634 ISS nucleus
GO:0005730 ISS nucleolus
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006414 IEA translational elongation
GO:0016020 IEA membrane
GO:0019901 IEA protein kinase binding
GO:0044822 IEA poly(A) RNA binding
GO:0070062 IEA extracellular vesicular exosome
GO:0071364 ISS cellular response to epidermal growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039502 eef1a1a eukaryotic translation elongation factor 1 alpha 1a protein_coding Danio_rerio
ENSDARG00000069951 eef1a1b eukaryotic translation elongation factor 1 alpha 1b protein_coding Danio_rerio
ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 protein_coding Homo_sapiens

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