C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488500 EEF1A1-011 ENSG00000156508 9606 - 6:73518794-73520059 retained_intron

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLungOvaryENST00000488500
Transcript ID Brain Breast Lung Ovary
ENST00000488500 118.702±0.00 292.655±0.00 459.064±0.00 869.588±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PO CIL_0006PO_0001 CGP 6:73461578-73523797
CIL_0006PR CIL_0006PR_0001 CGP 6:73515750-73654155

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 965
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 928
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 926
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 922
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 811
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 761
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 564
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 470
ENSMUST00000189839 RP24-342F15.1-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000189923 RP23-478L14.1-001 processed_pseudogene Mus_musculus 8e-28 128

Loading