C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial assembly of ribosomal large subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000476623 MALSU1-004 ENSG00000156928 9606 + 7:23307691-23309575 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000476623
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000476623 7.603±0.00 11.859±0.00 6.799±4.26 8.020±0.00 3.950±2.09 6.380±4.18 6.824±3.28 11.469±0.00 4.272±0.77 10.666±0.00 18.438±0.00 10.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059M CIL_00059M_0001 CGP 7:23235967-23311729
CIL_0003DP CIL_0003DP_0001 CGP 7:23298739-23470467

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114500 Malsu1-002 protein_coding Mus_musculus 0 337
ENSMUST00000031839 Malsu1-201 protein_coding Mus_musculus 0 331
ENSMUST00000128616 Malsu1-001 protein_coding Mus_musculus 0 331
ENSMUST00000139726 Malsu1-003 processed_transcript Mus_musculus 0 324

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