C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial assembly of ribosomal large subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000466681 MALSU1-001 ENSG00000156928 9606 + 7:23299200-23311729 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonOvaryENST00000466681
Transcript ID Bladder Brain Colon Ovary
ENST00000466681 0.125±0.00 0.271±0.00 0.313±0.00 0.560±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00059M CIL_00059M_0001 CGP 7:23235967-23311729
CIL_0003DP CIL_0003DP_0001 CGP 7:23298739-23470467

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0070130 IDA negative regulation of mitochondrial translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031839 Malsu1-201 protein_coding Mus_musculus 0 575
ENSMUST00000128616 Malsu1-001 protein_coding Mus_musculus 0 575
ENSMUST00000114500 Malsu1-002 protein_coding Mus_musculus 0 331
ENSMUST00000139726 Malsu1-003 processed_transcript Mus_musculus 0 316

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