C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactokinase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000156958 GALK2 9606 + 15:49155656-49367869 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000327171 GALK2-001 49155765-49331882 protein_coding
  ENST00000396509 GALK2-002 49170204-49328514 protein_coding
  ENST00000544523 GALK2-005 49170282-49328561 protein_coding
  ENST00000558145 GALK2-015 49170260-49235897 protein_coding
  ENST00000558399 GALK2-020 49283706-49367869 protein_coding
  ENST00000558775 GALK2-009 49155775-49239348 nonsense_mediated_decay
  ENST00000558956 GALK2-012 49170217-49239270 nonsense_mediated_decay
  ENST00000559040 GALK2-011 49155801-49226695 processed_transcript
  ENST00000559095 GALK2-014 49170249-49194210 processed_transcript
  ENST00000559208 GALK2-013 49170224-49283579 nonsense_mediated_decay
  ENST00000559423 GALK2-017 49170312-49283718 nonsense_mediated_decay
  ENST00000559454 GALK2-006 49170478-49328503 protein_coding
  ENST00000559580 GALK2-021 49292471-49367697 protein_coding
  ENST00000559883 GALK2-007 49155656-49282067 nonsense_mediated_decay
  ENST00000559963 GALK2-008 49155759-49239330 nonsense_mediated_decay
  ENST00000560031 GALK2-003 49170016-49328518 protein_coding
  ENST00000560119 GALK2-004 49170260-49328529 nonsense_mediated_decay
  ENST00000560138 GALK2-016 49170283-49292422 protein_coding
  ENST00000560528 GALK2-019 49319682-49328982 protein_coding
  ENST00000560654 GALK2-022 49155771-49239330 protein_coding
  ENST00000561014 GALK2-018 49239220-49319707 processed_transcript
  ENST00000561074 GALK2-010 49155794-49217297 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLiverLungOvaryPlacentaENST00000327171ENST00000396509ENST00000560031
Transcript ID Bladder Colon Liver Lung Ovary Placenta
ENST00000327171 N/A N/A 1.567±0.00 2.404±0.00 3.474±0.00 N/A
ENST00000396509 N/A N/A N/A N/A N/A 4.142±0.00
ENST00000560031 2.139±0.00 3.015±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PL CIL_0002PL_0001 CGP 15:48988476-49155661
CIL_0004QE CIL_0004QE_0002 CGP 15:49106068-49367869
CIL_0002E2 CIL_0002E2_0001 CGP 15:49155656-49620931

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004335 IEA:IDA galactokinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005975 TAS carbohydrate metabolic process
GO:0006012 IEA galactose metabolic process
GO:0033858 IEA N-acetylgalactosamine kinase activity
GO:0046835 IEA carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004059 galk2 galactokinase 2 protein_coding Danio_rerio
ENSMUSG00000027207 Galk2 galactokinase 2 protein_coding Mus_musculus

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