C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactokinase 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000027207 Galk2 10090 + 2:125859109-125984299 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000028636 Galk2-003 125859134-125984299 protein_coding
  ENSMUST00000094604 Galk2-001 125866107-125983587 protein_coding
  ENSMUST00000110454 Galk2-002 125866268-125947350 retained_intron
  ENSMUST00000125084 Galk2-004 125859148-125893431 protein_coding
  ENSMUST00000131643 Galk2-005 125866254-125929626 nonsense_mediated_decay
  ENSMUST00000134337 Galk2-007 125866107-125929570 protein_coding
  ENSMUST00000134798 Galk2-009 125866250-125896653 protein_coding
  ENSMUST00000135782 Galk2-006 125859109-125860287 processed_transcript
  ENSMUST00000140873 Galk2-008 125866243-125911444 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000094604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000094604 5.997±2.14 22.852±1.55 13.703±2.45 8.386±0.31 7.934±0.29 18.522±0.96 3.520±0.45 19.110±8.06 7.629±1.12 6.867±1.11 17.044±2.49 14.479±5.96 5.758±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002PL CIL_0002PL_0002 CGP 2:125736986-125859139
CIL_0004QE CIL_0004QE_0003 CGP 2:125830304-125984299
CIL_0002E2 CIL_0002E2_0002 CGP 2:125859109-126152004

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004335 IEA galactokinase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006012 IEA galactose metabolic process
GO:0033858 IEA N-acetylgalactosamine kinase activity
GO:0046835 IEA carbohydrate phosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004059 galk2 galactokinase 2 protein_coding Danio_rerio
ENSG00000156958 GALK2 galactokinase 2 protein_coding Homo_sapiens

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