C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002PL_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000138593-ENSG00000166200 | CGP | 9606 | 15:48988476-49155661  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000138593  (SECISBP2L)SECIS binding protein 2-like |
ENST00000261847 (SECISBP2L-004)
|
48988770-49046433 | protein_coding | |
|
ENST00000380927 (SECISBP2L-003)
|
48996384-49046446 | protein_coding | ||
|
ENST00000557923 (SECISBP2L-005)
|
49037395-49046446 | retained_intron | ||
|
ENST00000557940 (SECISBP2L-011)
|
49016917-49019647 | retained_intron | ||
|
ENST00000558461 (SECISBP2L-006)
|
49016952-49017793 | retained_intron | ||
|
ENST00000559122 (SECISBP2L-009)
|
48999920-49001941 | processed_transcript | ||
|
ENST00000559198 (SECISBP2L-008)
|
49011547-49013141 | retained_intron | ||
|
ENST00000559424 (SECISBP2L-002)
|
49016947-49046447 | protein_coding | ||
|
ENST00000559471 (SECISBP2L-001)
|
48988638-49046563 | protein_coding | ||
|
ENST00000561203 (SECISBP2L-007)
|
49016436-49017053 | retained_intron | ||
|
ENST00000561428 (SECISBP2L-010)
|
48988476-48996489 | protein_coding | ||
|
ENSG00000156958 (GALK2) galactokinase 2 |
ENST00000327171 (GALK2-001)
|
49155765-49331882 | protein_coding | |
|
ENST00000396509 (GALK2-002)
|
49170204-49328514 | protein_coding | ||
|
ENST00000544523 (GALK2-005)
|
49170282-49328561 | protein_coding | ||
|
ENST00000558145 (GALK2-015)
|
49170260-49235897 | protein_coding | ||
|
ENST00000558399 (GALK2-020)
|
49283706-49367869 | protein_coding | ||
|
ENST00000558775 (GALK2-009)
|
49155775-49239348 | nonsense_mediated_decay | ||
|
ENST00000558956 (GALK2-012)
|
49170217-49239270 | nonsense_mediated_decay | ||
|
ENST00000559040 (GALK2-011)
|
49155801-49226695 | processed_transcript | ||
|
ENST00000559095 (GALK2-014)
|
49170249-49194210 | processed_transcript | ||
|
ENST00000559208 (GALK2-013)
|
49170224-49283579 | nonsense_mediated_decay | ||
|
ENST00000559423 (GALK2-017)
|
49170312-49283718 | nonsense_mediated_decay | ||
|
ENST00000559454 (GALK2-006)
|
49170478-49328503 | protein_coding | ||
|
ENST00000559580 (GALK2-021)
|
49292471-49367697 | protein_coding | ||
|
ENST00000559883 (GALK2-007)
|
49155656-49282067 | nonsense_mediated_decay | ||
|
ENST00000559963 (GALK2-008)
|
49155759-49239330 | nonsense_mediated_decay | ||
|
ENST00000560031 (GALK2-003)
|
49170016-49328518 | protein_coding | ||
|
ENST00000560119 (GALK2-004)
|
49170260-49328529 | nonsense_mediated_decay | ||
|
ENST00000560138 (GALK2-016)
|
49170283-49292422 | protein_coding | ||
|
ENST00000560528 (GALK2-019)
|
49319682-49328982 | protein_coding | ||
|
ENST00000560654 (GALK2-022)
|
49155771-49239330 | protein_coding | ||
|
ENST00000561014 (GALK2-018)
|
49239220-49319707 | processed_transcript | ||
|
ENST00000561074 (GALK2-010)
|
49155794-49217297 | nonsense_mediated_decay | ||
|
ENSG00000166200 (COPS2) COP9 signalosome subunit 2 |
ENST00000299259 (COPS2-003)
|
49127350-49155661 | protein_coding | |
|
ENST00000388901 (COPS2-001)
|
49122728-49155652 | protein_coding | ||
|
ENST00000542928 (COPS2-002)
|
49127536-49155604 | protein_coding | ||
|
ENST00000558545 (COPS2-004)
|
49139258-49155604 | retained_intron | ||
|
ENST00000558843 (COPS2-006)
|
49134033-49155590 | protein_coding | ||
|
ENST00000559016 (COPS2-007)
|
49134135-49137459 | retained_intron | ||
|
ENST00000560240 (COPS2-008)
|
49106068-49130773 | nonsense_mediated_decay | ||
|
ENST00000561248 (COPS2-005)
|
49134083-49155604 | protein_coding | ||
|
ENSG00000200120 (Y_RNA) Y RNA |
ENST00000363250 (Y_RNA.1-312)
|
49137762-49137863 | misc_RNA | |
|
ENSG00000259656 (RP11-325E5.1) |
ENST00000557910 (RP11-325E5.1-001)
|
49101791-49103264 | lincRNA | |
|
ENSG00000265942 (RN7SL577P) RNA, 7SL, cytoplasmic 577, pseudogene |
ENST00000584532 (RN7SL577P-201)
|
49042341-49042643 | misc_RNA | |
| CIL_0002PL_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000035093-ENSMUSG00000027206 | CGP | 10090 | 2:125736986-125859139 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000027206 (Cops2) COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana) |
ENSMUST00000028635 (Cops2-002)
|
125831602-125859139 | protein_coding | |
|
ENSMUST00000110462 (Cops2-003)
|
125831599-125859039 | protein_coding | ||
|
ENSMUST00000110463 (Cops2-001)
|
125830304-125859139 | protein_coding | ||
|
ENSMUST00000139343 (Cops2-004)
|
125842722-125858996 | processed_transcript | ||
|
ENSMUST00000152683 (Cops2-005)
|
125849757-125859063 | processed_transcript | ||
|
ENSMUSG00000035093 (Secisbp2l) SECIS binding protein 2-like |
ENSMUST00000053699 (Secisbp2l-001)
|
125736986-125782870 | protein_coding | |
|
ENSMUST00000136450 (Secisbp2l-003)
|
125750378-125752264 | retained_intron | ||
|
ENSMUST00000139944 (Secisbp2l-002)
|
125744775-125760314 | protein_coding | ||
Expression Patterns
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