C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WD repeat domain, phosphoinositide interacting 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000157954 WIPI2 9606 + 7:5190188-5233826 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000288828 WIPI2-001 5190188-5233826 protein_coding
  ENST00000382384 WIPI2-007 5190273-5231470 protein_coding
  ENST00000401525 WIPI2-002 5190196-5231524 protein_coding
  ENST00000404704 WIPI2-008 5190246-5231104 protein_coding
  ENST00000465102 WIPI2-014 5214561-5222812 retained_intron
  ENST00000466014 WIPI2-003 5190259-5230947 retained_intron
  ENST00000471851 WIPI2-006 5225950-5231723 retained_intron
  ENST00000475309 WIPI2-004 5214186-5219031 retained_intron
  ENST00000479690 WIPI2-013 5229408-5231327 retained_intron
  ENST00000480238 WIPI2-011 5216172-5225854 processed_transcript
  ENST00000484262 WIPI2-005 5214269-5231064 protein_coding
  ENST00000485854 WIPI2-010 5190265-5214702 processed_transcript
  ENST00000488359 WIPI2-012 5216591-5225978 processed_transcript
  ENST00000496867 WIPI2-009 5190693-5218013 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000288828ENST00000382384ENST00000401525ENST00000404704ENST00000465102ENST00000471851ENST00000479690ENST00000484262ENST00000485854ENST00000496867
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000288828 N/A N/A N/A 2.817±0.00 4.078±0.00 2.756±1.92 0.896±0.71 1.798±0.00 3.261±0.00 2.827±0.00 N/A 4.437±3.54 8.047±3.49 N/A
ENST00000382384 7.145±0.00 N/A N/A 7.578±3.97 13.053±0.00 3.631±2.03 7.530±0.00 4.761±2.01 7.782±0.00 4.080±2.43 5.015±3.08 6.275±1.87 8.957±1.53 16.768±1.24
ENST00000401525 16.104±0.00 18.072±0.00 N/A 10.212±0.00 8.289±6.69 8.433±0.00 3.858±0.00 13.035±0.00 2.785±0.00 N/A 6.637±0.00 8.645±2.39 15.002±2.74 19.745±0.00
ENST00000404704 N/A N/A N/A N/A 3.989±0.00 N/A 1.103±0.00 1.661±0.00 1.768±0.00 5.168±3.32 N/A 8.724±6.67 9.549±2.67 74.192±0.00
ENST00000465102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.659±0.00 N/A N/A N/A
ENST00000471851 N/A N/A 0.806±0.00 1.610±0.00 N/A N/A 0.550±0.00 N/A 0.985±0.00 N/A N/A 2.427±0.00 N/A N/A
ENST00000479690 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.646±0.00
ENST00000484262 N/A N/A 1.638±0.00 3.095±0.00 N/A 1.791±0.00 N/A N/A N/A N/A 1.021±0.00 N/A N/A N/A
ENST00000485854 N/A N/A N/A N/A N/A N/A 1.111±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000496867 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.612±0.00 2.366±0.00 6.637±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M3 CIL_0002M3_0001 CGP 7:5190188-5306870

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000045 IMP autophagic vacuole assembly
GO:0000407 IDA pre-autophagosomal structure
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005776 IDA autophagic vacuole
GO:0005829 IDA cytosol
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0034045 IDA pre-autophagosomal structure membrane
GO:0043234 IDA protein complex
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037871 wipi2 WD repeat domain, phosphoinositide interacting 2 protein_coding Danio_rerio
ENSMUSG00000029578 Wipi2 WD repeat domain, phosphoinositide interacting 2 protein_coding Mus_musculus

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