C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coatomer protein complex, subunit gamma 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000158623 COPG2 9606 - 7:130506238-130668748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000330992 COPG2-003 130546787-130668705 protein_coding
  ENST00000425248 COPG2-001 130506238-130668748 protein_coding
  ENST00000617523 COPG2-002 130506524-130564511 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000425248ENST00000617523
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000425248 8.507±0.00 5.359±0.00 0.719±0.00 5.680±0.00 3.142±0.00 4.433±0.73 3.174±1.84 3.903±2.83 2.963±1.07 4.399±1.01 4.466±3.62 11.062±6.57 14.141±0.87
ENST00000617523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.650±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PP CIL_0008PP_0001 VISTA 7:130073108-130674619
CIL_0006OS CIL_0006OS_0001 CGP 7:130393771-130506296
CIL_000271 CIL_000271_0001 CGP 7:130486171-130668748
CIL_00027C CIL_00027C_0001 CGP 7:130506238-130687432

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005488 IEA binding
GO:0006886 IEA intracellular protein transport
GO:0006890 TAS retrograde vesicle-mediated transport, Golgi to ER
GO:0006891 IDA intra-Golgi vesicle-mediated transport
GO:0016192 IEA vesicle-mediated transport
GO:0030117 IEA membrane coat
GO:0030126 IDA:IEA COPI vesicle coat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034823 copg2 coatomer protein complex, subunit gamma 2 protein_coding Danio_rerio
ENSMUSG00000025607 Copg2 coatomer protein complex, subunit gamma 2 protein_coding Mus_musculus

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