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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | coatomer protein complex, subunit gamma 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000330992  |
COPG2-003 |
ENSG00000158623 |
9606 | - |
7:130546787-130668705  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008PP | CIL_0008PP_0001 | VISTA | 7:130073108-130674619 |
| CIL_0006OS | CIL_0006OS_0001 | CGP | 7:130393771-130506296 |
| CIL_000271 | CIL_000271_0001 | CGP | 7:130486171-130668748 |
| CIL_00027C | CIL_00027C_0001 | CGP | 7:130506238-130687432 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005198 | IEA | structural molecule activity |
| GO:0005488 | IEA | binding |
| GO:0006886 | IEA | intracellular protein transport |
| GO:0006890 | TAS | retrograde vesicle-mediated transport, Golgi to ER |
| GO:0006891 | IDA | intra-Golgi vesicle-mediated transport |
| GO:0016192 | IEA | vesicle-mediated transport |
| GO:0030117 | IEA | membrane coat |
| GO:0030126 | IDA:IEA | COPI vesicle coat |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000048774
|
Copg2-201 | protein_coding | Mus_musculus | 0 | 2996 |
|
ENSMUST00000166192
|
Copg2-202 | protein_coding | Mus_musculus | 0 | 1661 |
|
ENSDART00000043660
|
copg2-001 | protein_coding | Danio_rerio | 0 | 1308 |
|
ENSMUST00000135230
|
Copg2-001 | protein_coding | Mus_musculus | 0 | 1070 |
|
ENSMUST00000122833
|
Copg2-006 | retained_intron | Mus_musculus | 0 | 1062 |
|
ENSMUST00000131256
|
Copg2-002 | processed_transcript | Mus_musculus | 0 | 1026 |
|
ENSMUST00000133916
|
Copg2-004 | protein_coding | Mus_musculus | 0 | 867 |
|
ENSMUST00000113607
|
Copg1-001 | protein_coding | Mus_musculus | 0 | 821 |
|
ENSMUST00000149409
|
Copg1-006 | retained_intron | Mus_musculus | 0 | 357 |
|
ENSMUST00000149907
|
Copg1-004 | retained_intron | Mus_musculus | 0 | 228 |
|
ENSMUST00000049966
|
Copg1-003 | protein_coding | Mus_musculus | 9.99967e-42 | 176 |
|
ENSMUST00000134137
|
Copg2-003 | processed_transcript | Mus_musculus | 7e-29 | 134 |
|
ENSMUST00000137717
|
Copg1-002 | retained_intron | Mus_musculus | 0.00006 | 55 |
