C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159131 GART 9606 - 21:33503931-33543491 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361093 GART-004 33524009-33542114 protein_coding
  ENST00000366093 GART-014 33528266-33534630 nonsense_mediated_decay
  ENST00000381815 GART-003 33503931-33542138 protein_coding
  ENST00000381831 GART-001 33503931-33542842 protein_coding
  ENST00000381839 GART-006 33503931-33542861 protein_coding
  ENST00000424203 GART-002 33503933-33542892 nonsense_mediated_decay
  ENST00000426819 GART-009 33530787-33542793 protein_coding
  ENST00000430874 GART-007 33530759-33543491 protein_coding
  ENST00000438059 GART-008 33534579-33542820 protein_coding
  ENST00000441403 GART-010 33534587-33542363 protein_coding
  ENST00000460305 GART-005 33520522-33524828 processed_transcript
  ENST00000466882 GART-015 33528563-33531282 retained_intron
  ENST00000467575 GART-016 33522191-33528764 retained_intron
  ENST00000476524 GART-011 33531336-33542079 retained_intron
  ENST00000482663 GART-018 33506040-33510333 retained_intron
  ENST00000487155 GART-019 33509188-33511304 retained_intron
  ENST00000488791 GART-013 33531773-33534672 retained_intron
  ENST00000497313 GART-012 33530710-33534679 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMuscleOvaryPlacentaENST00000381815
Transcript ID Liver Muscle Ovary Placenta
ENST00000381815 11.217±0.00 14.880±0.00 25.979±7.36 16.531±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EH CIL_0007EH_0001 CGP 21:33485530-33543491
CIL_000466 CIL_000466_0001 CGP 21:33503931-33577481

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003360 IEA brainstem development
GO:0003824 IEA catalytic activity
GO:0004637 IEA phosphoribosylamine-glycine ligase activity
GO:0004641 IEA phosphoribosylformylglycinamidine cyclo-ligase activity
GO:0004644 IEA phosphoribosylglycinamide formyltransferase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006144 TAS purine nucleobase metabolic process
GO:0006189 IEA 'de novo' IMP biosynthetic process
GO:0006544 IEA glycine metabolic process
GO:0008168 IEA methyltransferase activity
GO:0009058 IEA biosynthetic process
GO:0009113 IEA purine nucleobase biosynthetic process
GO:0009156 IEA ribonucleoside monophosphate biosynthetic process
GO:0009168 TAS purine ribonucleoside monophosphate biosynthetic process
GO:0010033 IEA response to organic substance
GO:0010035 IEA response to inorganic substance
GO:0016742 IEA hydroxymethyl-, formyl- and related transferase activity
GO:0021549 IEA cerebellum development
GO:0021987 IEA cerebral cortex development
GO:0032259 IEA methylation
GO:0044281 TAS small molecule metabolic process
GO:0046654 IEA tetrahydrofolate biosynthetic process
GO:0046872 IEA metal ion binding
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051855 gart phosphoribosylglycinamide formyltransferase protein_coding Danio_rerio
ENSMUSG00000022962 Gart phosphoribosylglycinamide formyltransferase protein_coding Mus_musculus

Loading