C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000466_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159131-ENSG00000159140 CGP 9606 21:33503931-33577481
GeneTranscriptPositionBiotype
ENSG00000159140 (SON)
SON DNA binding protein 		ENST00000300278 (SON-003) 33543064-33560667 protein_coding
ENST00000356577 (SON-001) 33542618-33577481 protein_coding
ENST00000381679 (SON-006) 33543065-33559056 protein_coding
ENST00000381692 (SON-002) 33543052-33577481 protein_coding
ENST00000421541 (SON-008) 33555049-33567467 protein_coding
ENST00000429093 (SON-023) 33567160-33570198 nonsense_mediated_decay
ENST00000436227 (SON-007) 33552248-33577481 protein_coding
ENST00000455528 (SON-004) 33543064-33577481 nonsense_mediated_decay
ENST00000457208 (SON-013) 33567185-33576513 nonsense_mediated_decay
ENST00000465834 (SON-014) 33572527-33576881 retained_intron
ENST00000467616 (SON-019) 33569776-33576484 processed_transcript
ENST00000470533 (SON-022) 33571869-33576764 processed_transcript
ENST00000473102 (SON-018) 33571735-33576469 processed_transcript
ENST00000474355 (SON-012) 33567179-33569283 retained_intron
ENST00000475072 (SON-010) 33543052-33546752 retained_intron
ENST00000477419 (SON-015) 33573025-33576516 retained_intron
ENST00000478183 (SON-009) 33572213-33577481 retained_intron
ENST00000484294 (SON-017) 33571735-33576447 processed_transcript
ENST00000491794 (SON-016) 33573214-33576982 retained_intron
ENST00000492229 (SON-011) 33543070-33547039 processed_transcript
ENSG00000233956 (BTF3P6)
basic transcription factor 3 pseudogene 6 		ENST00000448054 (BTF3P6-001) 33518610-33519108 processed_pseudogene
CIL_000466_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022962-ENSMUSG00000022961 CGP 10090 16:91621186-91679221
GeneTranscriptPositionBiotype
ENSMUSG00000022960 (Donson)
downstream neighbor of SON 		ENSMUST00000023682 (Donson-001) 91679265-91688765 protein_coding
ENSMUST00000114031 (Donson-005) 91679265-91688765 protein_coding
ENSMUST00000117159 (Donson-003) 91679265-91688765 protein_coding
ENSMUST00000123893 (Donson-002) 91679265-91688765 retained_intron
ENSMUST00000133942 (Donson-007) 91677268-91684435 protein_coding
ENSMUST00000136699 (Donson-011) 91679522-91687875 nonsense_mediated_decay
ENSMUST00000138560 (Donson-009) 91679828-91688703 protein_coding
ENSMUST00000139324 (Donson-004) 91679265-91688765 nonsense_mediated_decay
ENSMUST00000144461 (Donson-006) 91679522-91688717 nonsense_mediated_decay
ENSMUST00000145833 (Donson-010) 91679522-91687875 nonsense_mediated_decay
ENSMUSG00000022961 (Son)
Son DNA binding protein 		ENSMUST00000114036 (Son-002) 91647880-91664033 protein_coding
ENSMUST00000114037 (Son-013) 91647879-91679195 protein_coding
ENSMUST00000117633 (Son-001) 91647506-91679207 protein_coding
ENSMUST00000119368 (Son-003) 91647879-91665708 protein_coding
ENSMUST00000122302 (Son-012) 91647885-91679221 protein_coding
ENSMUST00000129167 (Son-008) 91671349-91672710 processed_transcript
ENSMUST00000133589 (Son-009) 91664220-91672141 processed_transcript
ENSMUST00000140312 (Son-005) 91647879-91679195 nonsense_mediated_decay
ENSMUST00000145235 (Son-007) 91673671-91678120 processed_transcript
ENSMUST00000146079 (Son-010) 91674107-91678501 processed_transcript
ENSMUST00000147461 (Son-006) 91673441-91677612 processed_transcript
ENSMUST00000147891 (Son-004) 91659943-91679192 nonsense_mediated_decay
ENSMUST00000151503 (Son-011) 91674932-91677434 retained_intron
ENSMUSG00000022962 (Gart)
phosphoribosylglycinamide formyltransferase 		ENSMUST00000023684 (Gart-001) 91621186-91646952 protein_coding
ENSMUST00000120450 (Gart-002) 91633405-91646935 protein_coding
ENSMUST00000156713 (Gart-003) 91621393-91643146 nonsense_mediated_decay
ENSMUSG00000085337 (Gm15964)
predicted gene 15964 		ENSMUST00000138207 (Gm15964-001) 91611468-91623861 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000466_0001ENSG00000159140ENST00000300278ENST00000356577ENST00000381679ENST00000381692ENST00000421541ENST00000429093ENST00000436227ENST00000455528ENST00000457208ENST00000465834ENST00000467616ENST00000470533ENST00000473102ENST00000474355ENST00000475072ENST00000477419ENST00000478183ENST00000484294ENST00000491794ENST00000492229ENSG00000233956ENST00000448054CIL_000466_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000466_0001ENSG00000159140ENST00000300278ENST00000356577ENST00000381679ENST00000381692ENST00000436227ENST00000455528ENSG00000233956ENST00000448054CIL_000466_0002ENSMUSG00000022960ENSMUST00000023682ENSMUSG00000022961ENSMUST00000114036ENSMUST00000114037ENSMUST00000117633ENSMUST00000119368ENSMUST00000122302ENSMUST00000140312ENSMUST00000147461ENSMUST00000147891ENSMUSG00000022962ENSMUST00000023684ENSMUST00000120450ENSMUST00000156713ENSMUSG00000085337ENSMUST00000138207
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000159140 ENST00000300278 N/A 9.608±0.00 4.585±0.00 N/A N/A 6.223±0.00 N/A N/A 6.771±0.00 6.432±0.00 4.675±0.00 N/A N/A 18.828±0.00
ENST00000356577 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.792±2.64 N/A N/A
ENST00000381679 15.932±0.00 14.515±0.00 3.790±0.00 8.263±4.41 12.331±0.00 8.185±1.22 N/A 5.941±0.00 5.852±0.63 7.959±0.65 6.417±3.11 12.199±3.30 13.942±6.66 15.921±0.72
ENST00000381692 N/A 26.314±0.00 N/A 25.762±0.00 28.591±0.00 23.179±0.00 N/A N/A N/A 16.209±0.00 N/A 27.608±3.47 N/A 43.415±0.00
ENST00000421541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436227 N/A N/A 6.622±0.00 N/A 17.924±0.00 10.568±0.00 N/A 15.925±9.64 6.627±0.62 13.477±3.30 8.699±3.47 19.897±3.89 18.796±10.79 30.590±0.00
ENST00000455528 11.084±0.00 N/A N/A 3.105±0.00 N/A 8.595±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467616 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233956 ENST00000448054 0.024±0.00 0.195±0.00 0.127±0.00 N/A 0.617±0.00 N/A N/A 0.687±0.66 0.520±0.41 0.532±0.28 N/A 0.143±0.02 N/A 0.126±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022960 ENSMUST00000023682 N/A N/A N/A N/A N/A N/A N/A N/A 26.764±1.28 N/A N/A N/A N/A 41.251±1.23
ENSMUST00000114031 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000117159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022961 ENSMUST00000114036 11.739±3.96 66.721±8.88 7.606±0.00 13.490±0.03 23.601±4.51 12.744±2.30 N/A 6.985±0.49 9.721±4.18 17.809±2.92 N/A 49.280±17.98 11.238±2.23 10.650±0.68
ENSMUST00000114037 27.770±9.69 39.729±4.25 N/A 17.996±2.37 51.357±11.46 28.383±7.09 18.017±1.44 14.149±2.25 10.395±2.50 40.344±5.25 12.874±1.27 51.652±15.58 20.445±10.11 18.518±4.43
ENSMUST00000117633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.739±0.00 19.190±0.00
ENSMUST00000119368 7.556±0.00 16.888±0.00 N/A 31.134±0.00 22.722±11.91 13.206±2.32 N/A N/A 7.045±2.12 N/A N/A 36.861±15.36 17.597±8.96 N/A
ENSMUST00000122302 N/A N/A 56.609±6.17 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140312 18.828±3.87 N/A N/A 16.345±1.27 25.446±8.94 12.300±2.33 12.775±0.93 10.497±1.97 7.508±3.06 33.340±3.28 N/A 22.670±4.29 8.448±0.00 18.205±1.41
ENSMUST00000145235 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 251.157±0.00
ENSMUST00000147891 N/A N/A 20.385±2.77 25.519±6.54 N/A N/A N/A N/A 11.472±1.52 N/A 14.208±0.61 40.295±2.61 13.449±2.29 N/A
ENSMUST00000151503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022962 ENSMUST00000023684 7.558±2.12 2.680±0.86 5.810±1.38 7.021±0.00 4.180±1.34 5.511±1.66 3.600±0.47 4.156±0.97 10.997±12.37 5.010±0.57 4.142±0.85 7.707±2.77 7.932±1.98 3.946±0.78
ENSMUST00000120450 N/A N/A N/A 2.918±0.43 1.860±0.00 N/A 3.148±0.49 N/A 4.644±1.76 2.079±0.00 4.342±0.34 6.686±0.89 4.936±3.17 N/A
ENSMUST00000156713 3.899±1.09 2.285±1.21 3.925±0.07 5.702±3.54 3.047±0.82 1.347±0.04 2.215±0.69 3.493±0.72 4.426±2.80 1.795±0.35 5.632±1.54 7.333±5.85 10.006±9.40 3.820±1.82
ENSMUSG00000085337 ENSMUST00000138207 N/A 1.037±0.20 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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