C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SAP30 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161526 SAP30BP 9606 + 17:75667116-75708062 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000293208 SAP30BP-005 75667366-75706824 nonsense_mediated_decay
  ENST00000355423 SAP30BP-002 75667346-75708054 protein_coding
  ENST00000542343 SAP30BP-003 75667356-75706701 nonsense_mediated_decay
  ENST00000577292 SAP30BP-019 75667351-75703158 retained_intron
  ENST00000578288 SAP30BP-007 75667366-75691890 retained_intron
  ENST00000578354 SAP30BP-016 75667346-75693482 processed_transcript
  ENST00000578756 SAP30BP-021 75703770-75706757 retained_intron
  ENST00000578909 SAP30BP-017 75668516-75700259 protein_coding
  ENST00000579005 SAP30BP-025 75706185-75706756 processed_transcript
  ENST00000579864 SAP30BP-018 75667366-75703319 processed_transcript
  ENST00000579877 SAP30BP-013 75667362-75704814 nonsense_mediated_decay
  ENST00000580322 SAP30BP-008 75667374-75706756 nonsense_mediated_decay
  ENST00000580484 SAP30BP-024 75667370-75705746 retained_intron
  ENST00000580601 SAP30BP-009 75691570-75706774 retained_intron
  ENST00000581207 SAP30BP-023 75702480-75705480 retained_intron
  ENST00000581385 SAP30BP-022 75704714-75706406 retained_intron
  ENST00000582022 SAP30BP-006 75667371-75708062 nonsense_mediated_decay
  ENST00000583063 SAP30BP-027 75692546-75704814 protein_coding
  ENST00000583170 SAP30BP-011 75667251-75690716 nonsense_mediated_decay
  ENST00000583329 SAP30BP-020 75703266-75706701 retained_intron
  ENST00000583536 SAP30BP-015 75667426-75706545 protein_coding
  ENST00000583737 SAP30BP-014 75667366-75699872 nonsense_mediated_decay
  ENST00000584240 SAP30BP-026 75692044-75704768 protein_coding
  ENST00000584557 SAP30BP-010 75704772-75706771 retained_intron
  ENST00000584667 SAP30BP-001 75667116-75708059 protein_coding
  ENST00000584861 SAP30BP-012 75667351-75672156 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355423ENST00000542343ENST00000579877ENST00000580322ENST00000580484ENST00000582022ENST00000583737ENST00000584667ENST00000584861
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355423 N/A N/A N/A N/A N/A 14.252±0.00 4.432±3.52 N/A 7.179±0.00 12.879±0.00 4.222±0.00 N/A N/A N/A
ENST00000542343 30.270±0.00 N/A N/A 24.553±15.34 28.559±0.00 37.072±0.00 16.257±0.00 2.673±0.00 5.217±0.00 N/A 18.340±0.00 N/A N/A 36.011±0.00
ENST00000579877 33.908±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.636±0.00 N/A N/A N/A
ENST00000580322 N/A 42.171±0.00 N/A 27.980±0.00 16.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580484 N/A N/A 13.374±0.00 N/A N/A N/A 2.390±0.00 3.876±0.00 N/A N/A N/A N/A 10.750±0.00 N/A
ENST00000582022 7.440±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.974±0.00
ENST00000583737 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.210±0.00 N/A
ENST00000584667 N/A N/A N/A 6.629±0.00 N/A N/A 0.928±0.00 1.602±0.00 3.497±0.00 N/A N/A 19.190±5.36 16.284±5.20 16.952±0.00
ENST00000584861 N/A N/A N/A N/A N/A N/A N/A N/A 12.017±0.00 N/A N/A 36.962±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IO CIL_0007IO_0001 CGP 17:75626845-75667189
CIL_0002K8 CIL_0002K8_0002 CGP 17:75667116-75757818

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010942 IDA positive regulation of cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031261 sap30bp SAP30 binding protein protein_coding Danio_rerio
ENSMUSG00000020755 Sap30bp SAP30 binding protein protein_coding Mus_musculus

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