C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAP30 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000584667 SAP30BP-001 ENSG00000161526 9606 + 17:75667116-75708059 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverOvaryPlacentaTestisENST00000584667
Transcript ID Brain Heart Kidney Liver Ovary Placenta Testis
ENST00000584667 6.629±0.00 0.928±0.00 1.602±0.00 3.497±0.00 19.190±5.36 16.284±5.20 16.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IO CIL_0007IO_0001 CGP 17:75626845-75667189
CIL_0002K8 CIL_0002K8_0002 CGP 17:75667116-75757818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010942 IDA positive regulation of cell death

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140991 Sap30bp-001 protein_coding Mus_musculus 0 1304
ENSMUST00000021101 Sap30bp-002 processed_transcript Mus_musculus 0 579
ENSMUST00000131737 Sap30bp-004 processed_transcript Mus_musculus 0 351
ENSMUST00000146209 Sap30bp-003 processed_transcript Mus_musculus 0 250

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