C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SAP30 binding protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000020755 Sap30bp 10090 + 11:115933282-115966725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000021101 Sap30bp-002 115933674-115965535 processed_transcript
  ENSMUST00000131737 Sap30bp-004 115933637-115938408 processed_transcript
  ENSMUST00000140991 Sap30bp-001 115933282-115966725 protein_coding
  ENSMUST00000146209 Sap30bp-003 115933573-115957439 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000021101ENSMUST00000131737ENSMUST00000140991
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000021101 5.528±0.86 14.159±1.73 N/A 11.331±3.63 7.358±2.16 2.189±0.00 N/A 5.585±2.26 6.657±0.27 1.797±0.47 15.948±4.93 8.828±2.37 7.524±1.92
ENSMUST00000131737 N/A N/A N/A 47.094±0.00 N/A N/A N/A N/A N/A N/A 71.405±0.00 47.210±8.08 76.153±0.00
ENSMUST00000140991 4.312±1.04 5.559±2.46 12.166±1.18 12.306±4.50 3.182±0.82 3.099±0.39 9.867±0.92 4.676±2.57 4.683±1.43 3.339±0.78 10.006±3.69 9.026±3.13 5.942±1.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0002 VISTA 11:115369788-115971497
CIL_0007IO CIL_0007IO_0002 CGP 11:115892595-115933477
CIL_0002K8 CIL_0002K8_0003 CGP 11:115933282-116008412

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISS nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006915 IEA apoptotic process
GO:0010942 ISS positive regulation of cell death

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031261 sap30bp SAP30 binding protein protein_coding Danio_rerio
ENSG00000161526 SAP30BP SAP30 binding protein protein_coding Homo_sapiens

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