C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAP30 binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542343 SAP30BP-003 ENSG00000161526 9606 + 17:75667356-75706701 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleTestisENST00000542343
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Testis
ENST00000542343 30.270±0.00 24.553±15.34 28.559±0.00 37.072±0.00 16.257±0.00 2.673±0.00 5.217±0.00 18.340±0.00 36.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IO CIL_0007IO_0001 CGP 17:75626845-75667189
CIL_0002K8 CIL_0002K8_0002 CGP 17:75667116-75757818

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140991 Sap30bp-001 protein_coding Mus_musculus 0 597
ENSMUST00000021101 Sap30bp-002 processed_transcript Mus_musculus 0 579
ENSMUST00000131737 Sap30bp-004 processed_transcript Mus_musculus 0 333
ENSMUST00000146209 Sap30bp-003 processed_transcript Mus_musculus 0 250

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