C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SPC24, NDC80 kinetochore complex component
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161888 SPC24 9606 - 19:11131520-11155808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000423327 SPC24-002 11147081-11155807 nonsense_mediated_decay
  ENST00000585486 SPC24-004 11147599-11155769 protein_coding
  ENST00000585567 SPC24-008 11131520-11155782 protein_coding
  ENST00000586708 SPC24-007 11147134-11155761 protein_coding
  ENST00000591396 SPC24-006 11145923-11155764 protein_coding
  ENST00000592540 SPC24-001 11145494-11155808 protein_coding
  ENST00000592967 SPC24-005 11146022-11155765 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleTestisENST00000592540ENST00000592967
Transcript ID Heart Muscle Testis
ENST00000592540 N/A 0.530±0.00 1.641±0.00
ENST00000592967 1.035±0.00 N/A 4.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058P CIL_00058P_0003 CGP 19:10961001-11133816
CIL_000169 CIL_000169_0001 CGP 19:11089362-11155808
CIL_000167 CIL_000167_0001 CGP 19:11131520-11197791

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005829 TAS cytosol
GO:0007067 IEA mitotic nuclear division
GO:0031262 IDA Ndc80 complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093622 spc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000074476 Spc24 SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) protein_coding Mus_musculus

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