C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SPC24, NDC80 kinetochore complex component
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592540 SPC24-001 ENSG00000161888 9606 - 19:11145494-11155808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleTestisENST00000592540
Transcript ID Muscle Testis
ENST00000592540 0.530±0.00 1.641±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058P CIL_00058P_0003 CGP 19:10961001-11133816
CIL_000169 CIL_000169_0001 CGP 19:11089362-11155808
CIL_000167 CIL_000167_0001 CGP 19:11131520-11197791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005829 TAS cytosol
GO:0007067 IEA mitotic nuclear division
GO:0031262 IDA Ndc80 complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000000001 69

Loading