C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_000167_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000161888-ENSG00000197256 | CGP | 9606 | 19:11131520-11197791  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000130164  (LDLR)low density lipoprotein receptor |
ENST00000252444 (LDLR-004)
|
11090599-11133816 | protein_coding | |
|
ENST00000455727 (LDLR-007)
|
11089463-11131484 | protein_coding | ||
|
ENST00000535915 (LDLR-001)
|
11089463-11131538 | protein_coding | ||
|
ENST00000545707 (LDLR-006)
|
11089463-11131610 | protein_coding | ||
|
ENST00000557933 (LDLR-012)
|
11089462-11131525 | protein_coding | ||
|
ENST00000557958 (LDLR-009)
|
11089463-11104268 | retained_intron | ||
|
ENST00000558013 (LDLR-002)
|
11089478-11131812 | protein_coding | ||
|
ENST00000558518 (LDLR-003)
|
11089362-11132163 | protein_coding | ||
|
ENST00000558528 (LDLR-010)
|
11106356-11107515 | retained_intron | ||
|
ENST00000559340 (LDLR-015)
|
11113371-11120406 | nonsense_mediated_decay | ||
|
ENST00000560173 (LDLR-013)
|
11110713-11113481 | retained_intron | ||
|
ENST00000560467 (LDLR-011)
|
11105307-11113624 | protein_coding | ||
|
ENST00000560502 (LDLR-008)
|
11089463-11100578 | retained_intron | ||
|
ENST00000560628 (LDLR-014)
|
11127547-11133521 | processed_transcript | ||
|
ENSG00000197256 (KANK2) KN motif and ankyrin repeat domains 2 |
ENST00000586659 (KANK2-001)
|
11164267-11197521 | protein_coding | |
|
ENST00000587317 (KANK2-013)
|
11166309-11170415 | processed_transcript | ||
|
ENST00000588724 (KANK2-007)
|
11193946-11197548 | protein_coding | ||
|
ENST00000588787 (KANK2-005)
|
11164270-11175947 | protein_coding | ||
|
ENST00000589359 (KANK2-003)
|
11166558-11197547 | protein_coding | ||
|
ENST00000589427 (KANK2-014)
|
11196058-11197183 | retained_intron | ||
|
ENST00000589894 (KANK2-015)
|
11169676-11194511 | protein_coding | ||
|
ENST00000590095 (KANK2-009)
|
11195623-11196227 | processed_transcript | ||
|
ENST00000590400 (KANK2-006)
|
11192432-11197791 | retained_intron | ||
|
ENST00000590685 (KANK2-012)
|
11193637-11195192 | protein_coding | ||
|
ENST00000592215 (KANK2-010)
|
11194553-11196229 | processed_transcript | ||
|
ENST00000592675 (KANK2-008)
|
11192881-11195685 | protein_coding | ||
|
ENST00000592903 (KANK2-011)
|
11194504-11197530 | protein_coding | ||
| CIL_000167_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000074476-ENSMUSG00000032194 | CGP | 10090 | 9:21755442-21798546 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000032194 (Kank2) KN motif and ankyrin repeat domains 2 |
ENSMUST00000034717 (Kank2-201)
|
21766773-21798546 | protein_coding | |
|
ENSMUSG00000074476 (Spc24) SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae) |
ENSMUST00000098942 (Spc24-201)
|
21755442-21760286 | protein_coding | |
Expression Patterns
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