C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SLP adaptor and CSK interacting membrane protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000161929 SCIMP 9606 - 17:5208961-5234860 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399600 SCIMP-003 5210150-5234860 protein_coding
  ENST00000571800 SCIMP-002 5213012-5234823 protein_coding
  ENST00000574081 SCIMP-001 5208961-5234860 protein_coding
  ENST00000574297 SCIMP-004 5214656-5234860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399600ENST00000571800ENST00000574081ENST00000574297
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399600 0.455±0.00 N/A 0.625±0.00 N/A N/A 0.491±0.00 0.158±0.00 1.318±0.00 0.493±0.00 1.591±0.54 0.167±0.00 N/A N/A N/A
ENST00000571800 N/A N/A N/A 0.470±0.00 0.522±0.00 0.182±0.04 0.187±0.00 0.397±0.00 0.420±0.00 0.552±0.00 N/A 0.317±0.00 0.439±0.00 0.551±0.10
ENST00000574081 0.306±0.00 9.355±0.00 N/A N/A 1.101±0.00 0.172±0.04 0.109±0.08 N/A 0.641±0.40 0.952±0.00 N/A 0.378±0.13 0.729±0.00 N/A
ENST00000574297 N/A N/A N/A 0.762±0.00 N/A N/A 0.216±0.00 2.051±0.00 N/A N/A N/A N/A 1.575±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020X CIL_00020X_0001 CGP 17:5208961-5385812

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001772 IDA immunological synapse
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031256 IDA leading edge membrane
GO:0031259 IDA uropod membrane
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000057135 Scimp SLP adaptor and CSK interacting membrane protein protein_coding Mus_musculus

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