C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLP adaptor and CSK interacting membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000399600 SCIMP-003 ENSG00000161929 9606 - 17:5210150-5234860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonHeartKidneyLiverLungMuscleENST00000399600
Transcript ID Adipose Bladder Colon Heart Kidney Liver Lung Muscle
ENST00000399600 0.455±0.00 0.625±0.00 0.491±0.00 0.158±0.00 1.318±0.00 0.493±0.00 1.591±0.54 0.167±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020X CIL_00020X_0001 CGP 17:5208961-5385812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IDA immunological synapse
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031256 IDA leading edge membrane
GO:0031259 IDA uropod membrane
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074572 Scimp-002 protein_coding Mus_musculus 8.96831e-44 182
ENSMUST00000108534 Scimp-001 protein_coding Mus_musculus 3e-38 163

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