C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLP adaptor and CSK interacting membrane protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571800 SCIMP-002 ENSG00000161929 9606 - 17:5213012-5234823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000571800
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000571800 0.470±0.00 0.522±0.00 0.182±0.04 0.187±0.00 0.397±0.00 0.420±0.00 0.552±0.00 0.317±0.00 0.439±0.00 0.551±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020X CIL_00020X_0001 CGP 17:5208961-5385812

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001772 IDA immunological synapse
GO:0005515 IPI protein binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0031256 IDA leading edge membrane
GO:0031259 IDA uropod membrane
GO:0070374 IDA positive regulation of ERK1 and ERK2 cascade
GO:0097197 IDA tetraspanin-enriched microdomain

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074572 Scimp-002 protein_coding Mus_musculus 5e-29 134
ENSMUST00000108534 Scimp-001 protein_coding Mus_musculus 2e-23 115

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