C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ClpB caseinolytic peptidase B homolog (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162129 CLPB 9606 - 11:72292425-72434680 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294053 CLPB-001 72292425-72434648 protein_coding
  ENST00000340729 CLPB-002 72293303-72434534 protein_coding
  ENST00000437826 CLPB-201 72292425-72434680 protein_coding
  ENST00000445069 CLPB-009 72354267-72434613 protein_coding
  ENST00000535477 CLPB-005 72293316-72434510 nonsense_mediated_decay
  ENST00000535990 CLPB-006 72293303-72434382 protein_coding
  ENST00000536297 CLPB-012 72356881-72380302 nonsense_mediated_decay
  ENST00000538021 CLPB-007 72293310-72308584 protein_coding
  ENST00000538039 CLPB-003 72292446-72434597 protein_coding
  ENST00000539148 CLPB-011 72329785-72430445 protein_coding
  ENST00000542555 CLPB-014 72428808-72434141 processed_transcript
  ENST00000543042 CLPB-004 72293309-72434640 protein_coding
  ENST00000544382 CLPB-013 72294621-72359206 protein_coding
  ENST00000544683 CLPB-010 72317198-72430494 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294053ENST00000340729ENST00000535477ENST00000538021ENST00000538039ENST00000543042ENST00000544382ENST00000544683
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294053 N/A N/A N/A N/A 0.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000340729 3.888±0.00 N/A 5.978±0.00 1.081±0.00 1.012±0.00 0.652±0.00 N/A 3.777±0.00 2.444±0.00 3.851±0.00 2.396±0.59 1.326±0.12 46.633±3.84
ENST00000535477 N/A 1.555±0.00 N/A 1.938±0.42 N/A 0.555±0.00 1.699±0.00 N/A N/A 2.837±0.00 1.343±0.00 2.293±0.48 N/A
ENST00000538021 3.119±0.00 4.191±0.00 N/A 2.051±0.00 0.915±0.00 N/A N/A 5.509±0.00 1.933±0.00 5.426±0.00 4.416±2.79 7.384±0.00 165.624±0.00
ENST00000538039 N/A N/A 1.464±0.00 N/A 0.760±0.05 0.886±0.32 N/A 1.403±0.00 0.662±0.00 N/A 1.580±0.14 1.515±0.36 N/A
ENST00000543042 N/A N/A N/A N/A 1.037±0.00 0.875±0.00 3.715±0.00 2.410±0.00 N/A N/A N/A N/A 30.893±0.00
ENST00000544382 N/A N/A 7.039±0.00 3.329±0.00 0.822±0.00 N/A 7.902±0.00 1.328±0.00 2.193±0.00 2.438±0.00 6.889±0.00 N/A N/A
ENST00000544683 N/A N/A N/A N/A 1.245±0.00 N/A N/A 2.358±0.00 3.786±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000088463 CLPB ClpB caseinolytic peptidase B homolog (E. coli) protein_coding Danio_rerio
ENSMUSG00000001829 Clpb ClpB caseinolytic peptidase B protein_coding Mus_musculus

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