C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ClpB caseinolytic peptidase B homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000340729 CLPB-002 ENSG00000162129 9606 - 11:72293303-72434534 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000340729
Transcript ID Adipose Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000340729 3.888±0.00 5.978±0.00 1.081±0.00 1.012±0.00 0.652±0.00 3.777±0.00 2.444±0.00 3.851±0.00 2.396±0.59 1.326±0.12 46.633±3.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity
GO:0034605 IDA cellular response to heat

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001884 Clpb-001 protein_coding Mus_musculus 0 1899
ENSMUST00000106998 Clpb-003 protein_coding Mus_musculus 0 1755
ENSMUST00000150355 Clpb-006 retained_intron Mus_musculus 0 1465
ENSMUST00000150832 Clpb-011 processed_transcript Mus_musculus 0 784

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