C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ClpB caseinolytic peptidase B homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543042 CLPB-004 ENSG00000162129 9606 - 11:72293309-72434640 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartKidneyLiverTestisENST00000543042
Transcript ID Colon Heart Kidney Liver Testis
ENST00000543042 1.037±0.00 0.875±0.00 3.715±0.00 2.410±0.00 30.893±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001884 Clpb-001 protein_coding Mus_musculus 0 1958
ENSMUST00000106998 Clpb-003 protein_coding Mus_musculus 0 1744
ENSMUST00000150355 Clpb-006 retained_intron Mus_musculus 0 1535
ENSMUST00000150832 Clpb-011 processed_transcript Mus_musculus 0 784
ENSMUST00000137214 Clpb-002 retained_intron Mus_musculus 0 294

Loading