C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ClpB caseinolytic peptidase B homolog (E. coli)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000535477 CLPB-005 ENSG00000162129 9606 - 11:72293316-72434510 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyMuscleOvaryPlacentaENST00000535477
Transcript ID Adrenal Breast Heart Kidney Muscle Ovary Placenta
ENST00000535477 1.555±0.00 1.938±0.42 0.555±0.00 1.699±0.00 2.837±0.00 1.343±0.00 2.293±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0001 VISTA 11:72069476-72670457

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016301 IEA kinase activity
GO:0016887 IEA ATPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150355 Clpb-006 retained_intron Mus_musculus 0 1548
ENSMUST00000001884 Clpb-001 protein_coding Mus_musculus 0 1548
ENSMUST00000106998 Clpb-003 protein_coding Mus_musculus 0 1046
ENSMUST00000150832 Clpb-011 processed_transcript Mus_musculus 0 784

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