C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 496
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000162714 ZNF496 9606 - 1:247297412-247331846 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000294753 ZNF496-001 247297412-247331743 protein_coding
  ENST00000461277 ZNF496-002 247298201-247329245 protein_coding
  ENST00000462139 ZNF496-004 247297412-247313852 processed_transcript
  ENST00000477903 ZNF496-006 247328728-247331845 processed_transcript
  ENST00000478225 ZNF496-005 247328676-247331846 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000294753ENST00000461277ENST00000462139
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000294753 N/A 1.521±0.00 N/A N/A 0.638±0.00 N/A 1.121±0.00 1.137±0.88 N/A N/A N/A 1.964±0.31 1.257±0.51 2.978±0.42
ENST00000461277 5.111±0.00 3.856±0.00 0.745±0.00 1.568±0.13 1.429±0.79 1.788±0.94 2.362±0.00 2.919±0.00 0.587±0.22 4.896±0.00 2.608±1.58 3.780±2.50 4.202±0.71 7.789±0.98
ENST00000462139 N/A N/A N/A 0.164±0.00 N/A 0.407±0.00 0.138±0.00 0.067±0.00 0.279±0.22 0.427±0.14 N/A 0.519±0.18 N/A 1.225±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TS CIL_0006TS_0001 CGP 1:247297412-247449108

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003676 IEA nucleic acid binding
GO:0003677 ISS DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 ISS:IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0016604 IEA nuclear body
GO:0043621 IEA protein self-association
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000020472 Zkscan17 zinc finger with KRAB and SCAN domains 17 protein_coding Mus_musculus

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